Author
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
11 papers
Recent·Most cited
M. Jayakodi, Q. Lu, H. Pidon, M. T. Rabanus-Wallace, M. Bayer, T. Lux, Y. Guo, B. Jaegle, A. Badea, W. Bekele, G. Brar, K. Braune, B. Bunk, K. Chalmers, B. Chapman, , K. Pillen
This study presents a barley pangenome revealing structural variation linked to traits like disease resistance and plant architecture, highlighting its role in adaptive evolution.
bioRxiv · Feb 14, 2024 · PreprintPlant Biology
T. Shinohara, J.-R. A. J. Moonen, Y. H. Chun, Y. C. Lee-Yow, K. Okamura, J. M. Szafron, J. Kaplan, A. Cao, L. Wang, S. Taylor, S. Isobe, M. Dong, W. Yang, K. Guo, B. D. Franco, , M. Rabinovitch
The paper shows high shear stress induces endothelial-mesenchymal transition and pulmonary arterial hypertension by reducing ERG expression, which can be mitigated by ERG replenishment.
bioRxiv · Feb 2, 2024Cell Biology
K.-i. Kurotani, H. Hirakawa, K. Shirasawa, K. Tagiri, M. Mori, Y. Ichihashi, T. Suzuki, Y. Tanizawa, Y. Nakamura, S. Isobe, M. Notaguchi
The paper develops a web-based platform for analyzing Nicotiana benthamiana genome and transcriptome data, enabling gene expression visualization, phylogenetic analysis, and functional enrichment.
bioRxiv · Sep 3, 2023 · PreprintPlant Biology
K. Shirasawa, T. Esumi, A. Itai, K. Hatakeyama, T. Takashina, T. Yakuwa, K. Sumitomo, T. Kurokura, E. Fukai, K. Sato, T. Shimada, K. Shiratake, M. Hosokawa, Y. Monden, M. Kusaba, , S. Isobe
The paper traces the propagation path of the Somei-Yoshino cherry cultivar by identifying somatic mutations across 46 clones and clustering them into genetic groups.
bioRxiv · Jul 11, 2023Plant Biology
Y. Yoshioka, A. Nashiki, A. Zaelani, S. Isobe, K. Shirasawa, K. Shimomura, A. Ohyama
This study identifies two major QTLs associated with parthenocarpic ability in melon and validates DNA markers for selecting plants with this trait.
bioRxiv · Feb 16, 2023 · PreprintPlant Biology
A. Nashiki, H. Matsuo, K. Takano, F. Fitriyah, S. Isobe, K. Shirasawa, Y. Yoshioka
This study identifies two novel sex determination loci in Japanese weedy melon, showing unique sex expression due to interactions with known genes.
bioRxiv · Jan 20, 2023Plant Biology
H. Matsuo, S. Isobe, K. Shirasawa, Y. Yoshioka
The paper identifies novel QTLs in cucumber conferring resistance to two different pathogenic races of Colletotrichum orbiculare using genetic mapping of F2:3 families.
bioRxiv · Feb 28, 2022 · PreprintPlant Biology
K. Shirasawa, T. Esumi, A. Itai, S. Isobe
The paper analyzes transcriptome dynamics in flowering cherry buds and flowers to identify genes involved in blooming and petal movement, and proposes a bloom forecasting method using gene expression markers.
bioRxiv · Oct 26, 2021Plant Biology
M. Nakano, H. Hirakawa, E. Fukai, A. Toyoda, R. Kajitani, Y. Minakuchi, T. Itoh, Y. Higuchi, T. Kozuka, H. Bono, K. Shirasawa, I. Shiraiwa, K. Sumitomo, T. Hisamatsu, M. Shibata, , M. Kusaba
The paper presents a chromosome-level genome sequence of a diploid chrysanthemum, identifies recent retrotransposon activity, and demonstrates its utility for positional cloning and breeding.
bioRxiv · Jun 28, 2021Plant Biology
M. Ichikawa, N. Kato, E. Toda, M. Kashihara, Y. Ishida, Y. Hiei, S. Isobe, K. Shirasawa, H. Hirakawa, T. Okamoto, T. Komari
The paper analyzes whole-genome sequences of rice plants regenerated from different embryonic sources to assess somaclonal variation and mutation rates.
bioRxiv · Jan 20, 2021Plant Biology
S. Taylor, K. Contrepois, B. Benayoun, L. A. Jiang, S. Isobe, L. Wang, S. Melemenidis, M. O. Ozen, S. Otsuki, T. Shinohara, A. J. Sweatt, J. Kaplan, A. Cao, J.-R. Moonen, D. P. Marciano, , M. Rabinovitch
The paper shows that endogenous retroviruses contribute to neutrophil dysfunction and exosome-mediated pulmonary arterial hypertension.
bioRxiv · Jan 8, 2021Immunology