Author

K. N. Thompson

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cancer & tumor microenvironment· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1

Frequent Co-Authors

A. A. Gad· 1 shared A. Rahnavard· 1 shared A. Subramanian· 1 shared B. Ren· 1 shared C. Huttenhower· 1 shared D. A. Annis· 1 shared D. E. Gilchrist· 1 shared E. A. Franzosa· 1 shared

Activity by Year

2021-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperCancer Biology

A. A. Gad

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Author profile →

2 papers

Recent·Most cited

Disruption of P2Y2 signaling promotes breast tumor cell dissemination by reducing ATP-dependent calcium elevation and actin localization to cell junctions

M. L. Mull, S. J. P. Pratt, K. N. Thompson, D. A. Annis, A. A. Gad, R. M. Lee, K. T. Chang, M. B. Stemberger, J. A. Ju, D. E. Gilchrist, L. Boyman, M. I. Vitolo, W. J. Lederer, S. S. Martin

This study shows that P2Y2 receptor signaling, which increases intracellular calcium and actin localization in non-tumorigenic breast cells, is disrupted in metastatic cells, promoting dissemination.

bioRxiv · Mar 31, 2023Cancer Biology

{-}Multivariable Association Discovery in Population-scale Meta-omics Studies

H. Mallick, A. Rahnavard, L. J. McIver, S. Ma, Y. Zhang, L. H. Nguyen, T. L. Tickle, G. Weingart, B. Ren, E. H. Schwager, S. Chatterjee, K. N. Thompson, J. E. Wilkinson, A. Subramanian, Y. Lu, , C. Huttenhower

This paper introduces MaAsLin 2, a method for analyzing multivariable associations in microbial multi-omics data, and applies it to reveal new insights into inflammatory bowel disease.

bioRxiv · Jan 20, 2021Microbiology