Author

Kennith Carpio-Perkins

University of California San Diego

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 2 Physiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Organism:human· 3 Assay:bulk RNA-seq· 2 Research Focus:host-pathogen & immune response· 2 Assay:proteomics· 2 Approach:biophysical modeling· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1

Frequent Co-Authors

Gajanan Dattatray KatkariD· 3 shared Madhubanti MullickiD· 3 shared Pradipta GhoshiD· 3 shared Saptarshi SinhaiD· 3 shared Celia R. Espinoza· 2 shared Courtney TindleiD· 2 shared Ella McLareniD· 2 shared Kameron M. Zablan· 2 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersImmunology

Gajanan Dattatray KatkarORCID

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Author profile →

3 papers

Recent·Most cited

A stromal-state dichotomy governs recalcitrance or remission in inflammatory bowel disease

Courtney Tindle, Harrison M. Penrose, Saptarshi Sinha, Madhubanti Mullick, Kennith Carpio-Perkins, Mason Hayashi, Sophia Carpinelli, Ella McLaren, Chia-Chian Hsieh, Kameron M. Zablan, Helen N. Le, Jennifer Neill, Gajanan Dattatray Katkar, W Sandborn, Brigid Sweeney Boland, Pradipta Ghosh

This paper identifies two stromal states in IBD that predict clinical outcomes and shows that targeting one state can reverse disease pathology.

bioRxiv · Jun 13, 2026 · PreprintPhysiology

A NOD2-Encoded Toggle Switch Resolves the Host-Microbe Battle Over Cyclic AMP Control

Mahitha Shree Anandachar, David Chen, Kennith Carpio-Perkins, Gajanan Dattatray Katkar, Suchismita Roy, Celia R. Espinoza, Madhubanti Mullick, Saptarshi Sinha, Michelle Nakayama, Jasmin Salem, Megan L. Estanol, Rishav Bhattacharjee, Kameron M. Zablan, S. Hsu, Sinclair Williams, , Pradipta Ghosh

This paper identifies a host-encoded toggle switch involving NOD2 and GIV that controls cAMP levels in macrophages, converting tolerant cells into microbicidal machines to restore microbial clearance and gut barrier integrity.

bioRxiv · Mar 31, 2026 · PreprintImmunology

Distinct Colitis-Associated Macrophages Drive NOD2-Dependent Bacterial Sensing and Gut Homeostasis

Gajanan Dattatray Katkar, Mahitha Shree Anandachar, Stella‐Rita Ibeawuchi, Ella McLaren, Megan L. Estanol, Kennith Carpio-Perkins, S. Hsu, Celia R. Espinoza, Jane Coates, Yashaswat S. Malhotra, Madhubanti Mullick, Vanessa Castillo, Daniella T. Vo, Saptarshi Sinha, Pradipta Ghosh

The paper identifies niColAMs as critical for IBD recovery and shows GIV-NOD2 interaction is essential for microbial sensing and gut homeostasis.

Journal of Clinical Investigation · Oct 2, 2025Peer-reviewedImmunology