Author

Matthew Emery

Icahn School of Medicine at Mount Sinai

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2 Genetics· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Approach:experimental assay· 2 Assay:long-read sequencing· 2 Research Focus:variant calling· 2 Research Focus:database / resource· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Gintaras Y. DeikusiD· 3 shared Kaitlyn M. Shields· 3 shared Melissa Laird SmithiD· 3 shared Robert SebraiD· 3 shared Abdullah Dorgham· 2 shared Corey T. WatsoniD· 2 shared Evan E. EichleriD· 2 shared Oscar L. RodrigueziD· 2 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 40 mutual co-author links

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3 shared papersGenomics

Gintaras Y. DeikusORCID

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Author profile →

3 papers

Recent·Most cited

Development and validation of HIV SMRTcap for the characterization of HIV-1 reservoirs across tissues and subtypes

Ghazal Sadri, Steven T. Nadakal, William Lauer, Justin T. Kos, Parmit Kumar Singh, Erin Elliott, Catherine W. Kaiser, Easton E. Ford, Nadia Richardson, Kaitlyn M. Shields, Elizabeth Hudson, Noemi Linden, Ali Danesh, James Powell, Peter E. Warburton, , Melissa Laird Smith

The paper introduces HIV SMRTcap, a method for characterizing HIV-1 reservoirs by identifying integration sites and proviral integrity using long-read sequencing, and validates its performance across subtypes and tissue samples.

PLoS Pathogens · Jan 13, 2026Peer-reviewedGenomics

The human IG heavy chain constant gene locus is enriched for large structural variants and coding polymorphisms that vary among human populations

Uddalok Jana, Oscar L. Rodriguez, William Lees, Eric Engelbrecht, Zach Vanwinkle, Ayelet Peres, William S. Gibson, Kaitlyn M. Shields, Steven Schultze, Abdullah Dorgham, Matthew Emery, Gintaras Y. Deikus, Robert Sebra, Evan E. Eichler, Gur Yaari, , Corey T. Watson

The paper identifies structural variants and coding polymorphisms in the human IGHC locus, revealing population-specific diversity and potential functional impacts.

Cell Genomics · Oct 28, 2025Peer-reviewedGenomics

Characterization of the immunoglobulin lambda chain locus from diverse populations reveals extensive genetic variation

William S. Gibson, Oscar L. Rodriguez, Kaitlyn M. Shields, Catherine A. Silver, Abdullah Dorgham, Matthew Emery, Gintaras Y. Deikus, Robert Sebra, Evan E. Eichler, Ali Bashir, Melissa Laird Smith, Corey T. Watson

The paper characterizes the immunoglobulin lambda chain locus in diverse populations, identifying novel alleles and highlighting limitations of short-read sequencing.

Genes and Immunity · Dec 20, 2022Peer-reviewedGenetics