Author

Michael J. Doody

University of California, Santa Cruz

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Molecular Biology· 2 Genetics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:yeast· 2 Assay:ChIP-seq· 1 Research Focus:protein structure prediction· 1 Approach:statistical model· 1

Frequent Co-Authors

Hinrich BoegeriD· 2 shared Robert I. ShelanskyiD· 2 shared Alexander Hirschi· 1 shared Anushweta AsthanaiD· 1 shared Carlos BustamanteiD· 1 shared Christopher R. BrowniD· 1 shared Claire M. DelahuntyiD· 1 shared Daniel R. LarsoniD· 1 shared

Activity by Year

2022-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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2 shared papersMolecular Biology

Hinrich BoegerORCID

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3 papers

Recent·Most cited

Spt5's central KOW domains and the Pol II Stalk Collaborate to Regulate Chromatin and 3'-End Processing

Zach A. Morton, Michael J. Doody, Nayeli Naik, Nancy Paniagua, Claire M. Delahunty, John R. Yates, Carlos Bustamante, Grant A. Hartzog

This paper shows that Spt5's KOW domains and the Pol II stalk work together in yeast to regulate transcription termination and chromatin structure.

bioRxiv · Mar 13, 2026 · PreprintGenetics

A Telltale Sign of Irreversibility in Transcriptional Regulation

Robert I. Shelansky, Sara Abrahamsson, Michael J. Doody, Christopher R. Brown, Heta Patel, Tineke Laura Lenstra, Daniel R. Larson, Hinrich Boeger

The paper shows that transcriptional regulation in yeast is cyclic and irreversible, violating thermodynamic equilibrium.

bioRxiv · Jun 27, 2022 · PreprintMolecular Biology

The MuvB Complex Binds and Stabilizes Nucleosomes Downstream of the Transcription Start Site of Cell-Cycle Dependent Genes

Anushweta Asthana, Parameshwaran Ramanan, Alexander Hirschi, Keelan Z. Guiley, Tilini U. Wijeratne, Robert I. Shelansky, Michael J. Doody, Haritha Narasimhan, Hinrich Boeger, Sarvind Mani Tripathi, Gerd A. Müller, Seth M. Rubin

This study determines the structure of the MuvB complex and shows it binds and stabilizes nucleosomes downstream of the transcription start site to repress gene expression.

Nature Communications · Jan 26, 2022Peer-reviewedMolecular Biology