Author

P. Carninci

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 2 Bioengineering· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Organism:human· 3 Approach:deep learning· 2 Assay:scRNA-seq· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1

Frequent Co-Authors

A. Forrest· 1 shared A. Hasegawa· 1 shared A. Maeda· 1 shared A. Minoda· 1 shared A. Tachibana· 1 shared A. Tomoiu· 1 shared B. Kaczkowski· 1 shared B. Wang· 1 shared

Activity by Year

2019-2020 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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1 shared paperImmunology

A. Forrest

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Inducing Human Retinal Pigment Epithelium-like Cells from Somatic Tissue

I. N. Woogeng, I. Abugessaisa, A. Tachibana, Y. Sahara, C.-C. Hon, A. Hasegawa, B. Kaczkowski, N. Sakai, M. Nishida, H. Hu, H. Sanyal, J. Sho, T. Kasukawa, M. Takasato, P. Carninci, , C. Kime

This study develops a simplified method to induce RPE-like cells from human fibroblasts and validates their properties using single-cell RNA sequencing.

bioRxiv · Jul 27, 2020Bioengineering

Comprehensive characterisation of molecular host-pathogen interactions in influenza A virus-infected human macrophages

S. Clohisey, N. Parkinson, B. Wang, N. Bertin, H. Wise, A. Tomoiu, K. Summers, P. Carninci, A. Forrest, Y. Hayashizaki, P. Digard, D. Hume, J. K. Baillie, FANTOM 5 Consortium

This study characterizes molecular host-pathogen interactions in influenza A virus-infected human macrophages using CAGE sequencing, revealing snatching preferences and avoidance patterns of host RNAs.

bioRxiv · Jun 17, 2019 · PreprintImmunology

Single-cell transcriptomics reveals expansion of cytotoxic CD4 T-cells in supercentenarians

K. Hashimoto, T. Kouno, T. Ikawa, N. Hayatsu, Y. Miyajima, H. Yabukami, T. Terooatea, T. Sasaki, T. Suzuki, M. Valentine, G. Pascarella, Y. Okazaki, H. Suzuki, J. W. Shin, A. Minoda, , P. Carninci

This study identifies an increase in cytotoxic CD4 T-cells and a reduction in B-cells in supercentenarians through single-cell transcriptomics.

bioRxiv · May 20, 2019Immunology