Author

R. N. Culver

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Microbiology· 3 Bioengineering· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 4 Assay:metagenomics· 2 Organism:bacteria (other)· 1 Research Focus:cell type annotation· 1 Organism:E. coli· 1 Research Focus:ecology & biodiversity· 1 Assay:electrophysiology· 1 Research Focus:genome assembly· 1

Frequent Co-Authors

K. Huang· 3 shared A. L. Shiver· 2 shared A. Aranda-Diaz· 1 shared A. D. Patterson· 1 shared A. Deutschbauer· 1 shared A. I. Celis· 1 shared C. R. Buie· 1 shared D. P. Newton· 1 shared

Activity by Year

2021-2022 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 22 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersMicrobiology

K. Huang

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Fermented foods restructure gut microbiota and promote immune regulation via microbial metabolites

S. P. Spencer, E. G. Lemus Silva, E. Caffrey, R. N. Culver, R. H. Gellman, M. Wang, H. Wastyk, S. Higginbottom, J. L. Sonnenburg

This study shows fermented foods reshape gut microbiota and enhance immune regulation through microbial metabolites, independent of live microbes.

bioRxiv · May 11, 2022 · PreprintMicrobiology

Profiling of the human intestinal microbiome and bile acids under physiologic conditions using an ingestible sampling device

D. Shalon, R. N. Culver, J. A. Grembi, J. Folz, P. Treit, L. Dethlefsen, X. Meng, E. Yaffe, S. Spencer, H. Shi, A. Aranda-Diaz, A. D. Patterson, G. Triadafilopoulos, S. P. Holmes, M. Mann, , K. Huang

The paper develops an ingestible device to collect intestinal samples and identifies regional differences in microbiota and bile acids compared to stool.

bioRxiv · Jan 19, 2022 · PreprintMicrobiology

M-TUBE: a fabrication-free microfluidic device for large-volume bacterial electroporation requiring minimal assembly

P.-H. Huang, S. Chen, A. L. Shiver, R. N. Culver, K. Huang, C. R. Buie

The paper introduces a microfluidic device for large-volume bacterial electroporation that outperforms conventional cuvettes and generates a transposon mutant library in Bifidobacterium longum.

bioRxiv · Jan 14, 2022 · PreprintBioengineering

Construction and characterization of a genome-scale ordered mutant collection of Bacteroides thetaiotaomicron

H. A. Arjes, J. Sun, H. Liu, T. H. Nguyen, R. N. Culver, A. I. Celis, S. J. Walton, K. S. Vasquez, F. B. Yu, K. S. Xue, D. P. Newton, R. Zermeno, M. Weglarz, A. Deutschbauer, K. Huang, A. L. Shiver

The paper constructs an ordered mutant collection of Bacteroides thetaiotaomicron using transposon-insertion and barcode sequencing, identifies factors limiting coverage, and demonstrates phenotypic screening for growth defects and cell shape changes.

bioRxiv · Dec 27, 2021Microbiology