Author

R. Parsons

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 2 Ecology· 2 Physiology· 2 Immunology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 5 Research Focus:differential expression· 3 Organism:mouse· 3 Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Research Focus:ecology & biodiversity· 2 Research Focus:gene regulatory network inference· 2 Research Focus:host-pathogen & immune response· 2

Frequent Co-Authors

H. Oster· 2 shared I. Cascorbi· 2 shared I. Nagel· 2 shared J. Mittag· 2 shared J. T. Lacerda· 2 shared K. Janowska· 2 shared L. Harder· 2 shared L. V. de Assis· 2 shared

Activity by Year

2020-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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2 shared papersPhysiology

H. Oster

Mutual co-authors in cluster

Author profile →

8 papers

Recent·Most cited

Terrestrial 3D Laser Scanning for Ecosystem and Fire Effects Monitoring

M. C. Murphy, E. L. L. Loudermilk, S. Pokswinski, B. Williams, E. Link, L. Lienesch, L. Douglas, N. S. Skowronski, M. R. Gallagher, A. Maxwell, G. Snitker, C. M. Hawley, D. Wallace, I. Payne, T. Yurkiewicz, , J. Wallace

This paper introduces terrestrial laser scanning as an efficient, affordable method for ecosystem monitoring, enhancing data quality and repeatability through standardized data collection and automated analysis.

bioRxiv · Apr 9, 2024 · PreprintEcology

SARS-CoV-2 Omicron XBB lineage spike structures, conformations, antigenicity, and receptor recognition

Q. E. Zhang, J. Lindenberger, R. Parsons, B. Thakur, R. Parks, C. S. Park, X. Huang, S. Sammour, K. Janowska, T. N. Spence, R. J. Edwards, M. Martin, W. B. Williams, S. Gobeil, D. C. Montefiori, , P. Acharya

The paper determines cryo-EM structures of SARS-CoV-2 XBB lineage spike proteins, revealing structural changes that enhance immune evasion and receptor binding.

bioRxiv · Feb 12, 2024Biochemistry

Tuning of liver circadian transcriptome rhythms by thyroid hormone state in male mice

L. V. de Assis, L. Harder, J. T. Lacerda, R. Parsons, M. Kaehler, I. Cascorbi, I. Nagel, O. Rawashdeh, J. Mittag, H. Oster

This study investigates how thyroid hormone levels affect liver circadian transcriptome rhythms in mice, identifying 516 genes as molecular markers of liver TH state.

bioRxiv · Sep 23, 2023Physiology

Conformational flexibility of HIV-1 envelope glycoproteins modulates transmitted / founder sensitivity to broadly neutralizing antibodies

D. Parthasarathy, K. R. Pothula, K.-M. A. Dam, S. Ratnapriya, H. C. Benet, R. Parsons, X. Huang, S. Sammour, K. Janowska, M. Harris, S. Sacco, J. Sodroski, M. Bridges, W. Hubbell, P. Acharya, A. Herschhorn

This paper shows that some HIV-1 transmitted/founder Envs are incompletely closed, making them sensitive to antibodies targeting open conformations, and highlights the importance of Env conformational flexibility for bnAb neutralization.

bioRxiv · Sep 13, 2023Microbiology

Seasonal and daily patterns in known dissolved metabolites in the northwestern Sargasso Sea

K. Longnecker, M. C. Kido Soule, G. J. Swarr, R. Parsons, S. Liu, W. M. Johnson, B. Widner, R. Curry, C. A. Carlson, E. B. Kujawinski

The paper examines seasonal and daily patterns of dissolved metabolites in the northwestern Sargasso Sea, revealing depth- and time-dependent variations and seasonal trends in key compounds.

bioRxiv · Dec 21, 2022Biochemistry

Rewiring of liver diurnal transcriptome rhythms by triiodothyronine (T3) supplementation

L. V. de Assis, L. Harder, J. T. Lacerda, R. Parsons, M. Kaehler, I. Cascorbi, I. Nagel, O. Rawashdeh, J. Mittag, H. Oster

This study shows that T3 supplementation reorganizes liver transcriptome rhythms, affecting metabolic processes independently of local circadian clocks.

bioRxiv · Apr 28, 2022Physiology

P53 is a direct regulator of the immune co-stimulatory molecule CD80

E. Alibo, G. Mollaoglu, M. Dhainaut, R. Zhao, S. Rose, A. Baccarini, R. Parsons, B. D. Brown

This study identifies CD80 as a direct target of P53, showing that P53 loss reduces CD80 expression and impairs T cell priming in colorectal cancer.

bioRxiv · May 24, 2021 · PreprintImmunology

Modelling live fuel moisture content at leaf and canopy scale under extreme drought using SurEau-Ecos, a lumped plant hydraulic model

N. Martin-StPaul, J. Ruffault, C. Blackmann, H. Cochard, M. De Caceres, S. Delzon, J.-L. Dupuy, H. Fargeon, L. Lamarque, M. Moreno, R. Parsons, F. Pimont, J.-M. Ourcival, J. Torres-Ruiz, J.-M. Limousin

This paper uses the SurEau-Ecos model to simulate live fuel moisture content at leaf and canopy scales during drought, showing that foliage mortality and hydraulic traits drive LFMC changes.

bioRxiv · Jun 3, 2020 · PreprintEcology