Author

Shuang Liu

Jinan University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

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Microbiology· 4 Biochemistry· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Organism:E. coli· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Research Focus:host-pathogen & immune response· 2 Organism:human· 2 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1

Frequent Co-Authors

Nan Wu· 3 shared Shanshan Zhang· 3 shared Wenhong Zhang· 3 shared Ying Zhang· 3 shared Yumeng Zhang· 2 shared Anand VenkataramaniD· 1 shared Atul Tandon· 1 shared Brian S. ClarkiD· 1 shared

Activity by Year

2017-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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3 shared papersMicrobiology

Nan Wu

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

PTBP1 is upregulated by Zika virus infection via HIF-1alpha signal and hijacks NS1 protein to induce NS1 degradation to restrain viral replication

Menglan Rao, Yue Kong, Shuang Liu, Zicong Chen, Jiuxiu Lin, Yicong Liang, Zhiwei Lei, Zhen Luo

This study identifies that ZIKV upregulates PTBP1 via HIF-1alpha, which then binds NS1 to promote its degradation, thereby inhibiting viral replication.

Journal of Virology · Apr 27, 2026Peer-reviewedMicrobiology

Identification of small regulatory RNAs involved in persister formation

Shanshan Zhang, Shuang Liu, Nan Wu, Wenhong Zhang, Ying Zhang

This study identifies seven small regulatory RNAs involved in type II persister formation in uropathogenic E. coli.

bioRxiv · Apr 30, 2018 · PreprintMicrobiology

Identification of novel genes including rpmF and yjjQ critical for Type II persister formation in Escherichia coli

Shuang Liu, Nan Wu, Shanshan Zhang, Yumeng Zhang, Wenhong Zhang, Ying Zhang

This study identifies novel genes critical for Type II persister formation in E. coli by analyzing transcriptome changes during persister emergence and abundance and validating their roles through knockout and overexpression experiments.

bioRxiv · Apr 30, 2018 · PreprintMicrobiology

Identification of Polynucleotide Phosphorylase (PNPase) in Escherichia coli Involved in Persister Formation

Nan Wu, Yumeng Zhang, Shanshan Zhang, Youhua Yuan, Shuang Liu, Peng Cui, Wenhong Zhang, Ying Zhang

This study identifies PNPase as a key regulator of persister formation in E. coli by negatively regulating the crp operon at the post-transcriptional level.

bioRxiv · Apr 30, 2018 · PreprintMicrobiology

A toolbox of immunoprecipitation-grade monoclonal antibodies against human transcription factors.

Anand Venkataraman, Kun Yang, Jose Irizarry, Mark Mackiewicz, Paolo Mita, Zheng Kuang, Lin Xue, Devlina Ghosh, Shuang Liu, Pedro Ramos, Shaohui Hu, Diane Bayron, Sarah Keegan, Richard Saul, Simona Colantonio, , Seth Blackshaw

The paper develops a collection of 1406 validated monoclonal antibodies against human transcription factors and identifies factors contributing to their successful generation.

bioRxiv · Mar 16, 2017 · PreprintBiochemistry