Author

T. Hamada

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cell Biology· 2 Plant Biology· 2 Animal Behavior & Cognition· 1 Cancer Biology· 1 Physiology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 5 Approach:experimental assay· 5 Assay:bulk RNA-seq· 3 Organism:Arabidopsis· 2 Research Focus:cell signaling & trafficking· 2 Research Focus:development & morphogenesis· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2

Frequent Co-Authors

T. Takei· 2 shared A. Aiba· 1 shared A. d. Silva· 1 shared A. Dias Costa· 1 shared A. Doi· 1 shared C. J. Wu· 1 shared C. S. Fuchs· 1 shared H. Iwanaga· 1 shared

Activity by Year

2018-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 9 mutual co-author links

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2 shared papersPlant Biology

T. Takei

Mutual co-authors in cluster

Author profile →

7 papers

Recent·Most cited

Proteomic analysis to classify extracellular vesicles and plasmodesmata in Arabidopsis cell culture supernatants

T. Takei, T. Asou, N. Hamakawa, R. Noguchi, K. Sumiyoshi, K. Sueyoshi, K. Imami, T. Hamada

The paper identifies and distinguishes extracellular vesicle and plasmodesmata proteins in Arabidopsis cell culture supernatants using proteomic and imaging analyses.

bioRxiv · May 17, 2024 · PreprintPlant Biology

Time-course analysis of the transcriptome of Arabidopsis thaliana leaves under high-concentration ammonium sulfate treatment

H. Iwanaga, Y. Arai, M. Nezuo, A. Doi, T. Takei, M. Fujiwara, T. Hachiya, T. Hamada

This study analyzes the transcriptome of Arabidopsis thaliana leaves under high-concentration ammonium sulfate treatment over time, identifying gene expression changes related to stress responses and toxicity mechanisms.

bioRxiv · May 2, 2024Plant Biology

The role of hnRNP A3 on age-related increased expression of FIX in the Liver

T. Hamada, H. Kushige, S. Fukushima, S. Kurachi

This study investigates how hnRNP A3 affects age-related increases in FIX expression in the liver, finding that hnRNP A3 inhibition raises circulating FIX levels in aged mice.

bioRxiv · Apr 22, 2023 · PreprintPhysiology

Fission yeast Dis1 is an unconventional TOG/XMAP215 that induces microtubule catastrophe to drive chromosome pulling

Y. Murase, M. Yamagishi, N. Okada, M. Toya, J. Yajima, T. Hamada, M. Sato

This study shows that Dis1 in fission yeast promotes microtubule catastrophe at kinetochores to drive chromosome movement during cell division, differing from other TOG/XMAP215 orthologs.

bioRxiv · Aug 11, 2022Cell Biology

Tumor-Immune Partitioning and Clustering (TIPC) algorithm reveals distinct signatures of tumor-immune cell interactions within the tumor microenvironment

M. C. Lau, J. Borowsky, J. P. Vayrynen, K. Haruki, M. Zhao, A. Dias Costa, S. Gu, A. d. Silva, K. Arima, J. Yeong, K. D. Felt, T. Hamada, R. Nishihara, J. K. Lennerz, C. S. Fuchs, , J. A. Nowak

The paper introduces TIPC, a computational algorithm that identifies tumor-immune spatial patterns in colorectal cancer, linking them to patient survival and tumor features.

bioRxiv · May 29, 2020 · PreprintCancer Biology

Autologous adipose-derived stem cell transplantation enhances healing of wound with exposed bone in a rat model

T. Hamada, H. Matsubara, Y. Yoshida, S. Ugaji, I. Nomura, H. Tsuchiya

This study shows that autologous adipose-derived stem cells enhance wound healing with exposed bone in rats by promoting vascularization and gene expression.

bioRxiv · Mar 8, 2019Animal Behavior & Cognition

Rac-dependent signaling from keratinocytes promotes differentiation of intradermal white adipocytes

T. Ueyama, M. Sakuma, M. Nakatsuji, T. Uebi, T. Hamada, A. Aiba, N. Saito

This study shows that Rac-dependent signaling from keratinocytes promotes white and brown adipocyte differentiation through paracrine BMP2 and FGF21 pathways.

bioRxiv · Nov 19, 2018Cell Biology