Author

Y. Arai

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Biophysics· 1 Cell Biology· 1 Immunology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:human· 2 Approach:statistical model· 2 Organism:Arabidopsis· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1

Frequent Co-Authors

A. Doi· 1 shared A. Minoda· 1 shared A. Umezawa· 1 shared G. Pascarella· 1 shared H. Akutsu· 1 shared H. Iwanaga· 1 shared H. Okano· 1 shared H. Suzuki· 1 shared

Activity by Year

2017-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperPlant Biology

A. Doi

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Time-course analysis of the transcriptome of Arabidopsis thaliana leaves under high-concentration ammonium sulfate treatment

H. Iwanaga, Y. Arai, M. Nezuo, A. Doi, T. Takei, M. Fujiwara, T. Hachiya, T. Hamada

This study analyzes the transcriptome of Arabidopsis thaliana leaves under high-concentration ammonium sulfate treatment over time, identifying gene expression changes related to stress responses and toxicity mechanisms.

bioRxiv · May 2, 2024Plant Biology

Single-cell transcriptomics reveals expansion of cytotoxic CD4 T-cells in supercentenarians

K. Hashimoto, T. Kouno, T. Ikawa, N. Hayatsu, Y. Miyajima, H. Yabukami, T. Terooatea, T. Sasaki, T. Suzuki, M. Valentine, G. Pascarella, Y. Okazaki, H. Suzuki, J. W. Shin, A. Minoda, , P. Carninci

This study identifies an increase in cytotoxic CD4 T-cells and a reduction in B-cells in supercentenarians through single-cell transcriptomics.

bioRxiv · May 20, 2019Immunology

Epigenetic-scale comparison of human iPSCs generated by retrovirus, Sendai virus or episomal vectors

K. Nishino, Y. Arai, K. Takasawa, M. Toyoda, M. Yamazaki-Inoue, T. Sugawara, H. Akutsu, K. Nishimura, M. Ohtaka, M. Nakanishi, A. Umezawa

The paper compares epigenetic differences in human iPSCs generated by three different vectors and finds Sendai virus generates the fewest aberrant methylation sites.

bioRxiv · Jun 25, 2018Cell Biology

A spontaneously blinking fluorescent protein for simple single laser super-resolution live cell imaging

Y. Arai, H. Takauchi, Y. Ogami, S. Fujiwara, M. Nakano, T. Nagai

The paper introduces a fluorescent protein, SPOON, that spontaneously blinks in response to light and dehydration, enabling simple single-laser super-resolution imaging.

bioRxiv · Oct 8, 2017Biophysics