Author

I‐Ren Lee

National Taiwan Normal UniversityORCID 0000-0001-5655-6049Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Molecular Biology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Assay:DNA methylation· 2 Organism:E. coli· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:protein design· 1 Research Focus:protein structure prediction· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Cheng-Wei Ni· 1 shared Chih-Chiang Chang· 1 shared Edwin AntonyiD· 1 shared Fahad RashidiD· 1 shared Hsin-Hung David ChouiD· 1 shared James M. BergeriD· 1 shared Joshua Kevin Chang· 1 shared Lee-Wei YangiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperSystems Biology

Cheng-Wei Ni

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2 papers

Recent·Most cited

Systems BiologyNature CommunicationsPeer-reviewedJul 17, 2026

Core elements play distinct roles in promoter birth and transcriptional regulation

Syue-Ting Antony Kuo, Wei-Yi Shen, Shinn-Juh Lai…·Hsin-Hung David Chou

The paper investigates the roles of core promoter elements -35 and -10 in Escherichia coli, showing -10 is essential for promoter evolution while -35 influences gene regulation through interactions with transcription factors.

DOI 10.1038/s41467-026-75686-2

E. coliDNA methylation

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Molecular BiologyNucleic Acids ResearchPeer-reviewedJun 19, 2025

Mechanistic insights into direct DNA and RNA strand transfer and dynamic protein exchange of SSB and RPA

Tapas Paul, I‐Ren Lee, Sushil Pangeni…·Taekjip Ha

This study investigates the mechanisms of DNA and RNA strand transfer and protein exchange between SSB and RPA using smFRET, revealing dynamic interactions and length-dependent behavior.

3 citations

DNA methylationexperimental assay

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