Sam Griffiths‐Jones

RNAcentral integrates literature and gene-level data to enhance non-coding RNA sequence analysis and functional understanding.

miRScore validates miRNA annotations using sRNA-seq data by combining structural and expression analyses to improve accuracy and reliability.

This study shows LIMD1 is essential for effective miRNA targeting and repression by AGO2, revealing its role in expanding miRNA regulatory capacity beyond conserved targets.

This study identifies and characterizes piRNAs in the early embryo of Parhyale hawaiensis, showing their abundance early in development and subsequent reduction after germ cell specification.

The paper identifies de novo and inherited variants in U4 and U6 snRNAs causing retinitis pigmentosa and shows their impact on snRNP biogenesis.

Rfam 15.0 expands coverage to 26,106 genomes, improves RNA family annotations with 3D structures, and synchronizes with miRBase, enhancing RNA research and machine learning applications.

The paper identifies miR-92b-3p as a regulator of cardiovascular gene regulatory networks in mouse branchial arches, showing its role in downregulating cardiac transcription factors during development.

The paper identifies miR targetomes in primary human keratinocytes, showing that non-conserved binding sites contribute to mRNA repression during differentiation.

The paper analyzes ncRNA synthetic genetic networks in yeast, revealing environmental-dependent roles for U3 snoRNA paralogs and network plasticity.

This study shows that miR-9a regulates rhomboid mRNA and protein levels in Drosophila embryos by promoting mRNA degradation and inhibiting translation.

The paper sequenced microRNAs and mRNAs in Parhyale hawaiensis during embryonic development, identifying new microRNA loci and showing distinct expression dynamics during the maternal-zygotic transition.

The paper visualizes the co-expression of mir-9a and Senseless during Drosophila PNS development, revealing dynamic regulatory relationships that differ between embryonic and larval stages.

The paper identifies autoregulatory and dual feedback gene network motifs in human tissues, showing their prevalence and conservation, suggesting they drive dynamical gene expression.

The paper analyzes the house spider genome to identify an ancient whole-genome duplication shared by spiders and scorpions, distinct from horseshoe crab duplications.