Author

Benjamin A. Yang

Altos LabsORCID 0000-0001-7412-6261Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioengineering· 1 Cell Biology· 1 Immunology· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Organism:mouse· 3 Research Focus:cell signaling & trafficking· 2 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Assay:bulk RNA-seq· 1 Research Focus:cancer & tumor microenvironment· 1 Research Focus:development & morphogenesis· 1

Frequent Co-Authors

Carlos A. AguilariD· 2 shared Kristof A. TorkenczyiD· 2 shared Pamela DuraniD· 2 shared Stefka TyanovaiD· 2 shared Allen P. LiuiD· 1 shared Amber NolaniD· 1 shared Benjamin Henderson· 1 shared Claudia LoebeliD· 1 shared

Activity by Year

2024-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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2 shared papersBioengineering

Carlos A. AguilarORCID

Mutual co-authors in cluster

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4 papers

Recent·Most cited

ImmunologyNature CommunicationsPeer-reviewedOct 7, 2025

Fate mapping of peripherally derived macrophages reveals a long-lasting engrafted population that maintains a distinct transcriptomic profile for up to 8 months after Traumatic Brain Injury

Maria Serena Paladini, Benjamin A. Yang, Kristof A. Torkenczy…·Susanna Rosi

This study tracks the fate of monocyte-derived macrophages (MDMs) after traumatic brain injury (TBI) and finds they persist in the brain for up to 8 months, maintaining a distinct transcriptomic profile and phagocytic activity.

19 citationstop 1%

mousebulk RNA-seq

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NeurosciencebioRxivPreprintFeb 28, 2025

Mapping the ISR Landscape in Cognitive Disorders via single-cell multi-omics

Kristof A. Torkenczy, Lucas Charles Reineke, Sean W. Dooling…·Mauro Costa‐Mattioli

The paper generates a single-cell ISR atlas in a mouse model of persistent ISR activation, identifying cell-type-specific ISR programs and their roles in cognitive decline.

1 citation

mousescRNA-seq

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BioengineeringAdvanced BiologyPeer-reviewedApr 14, 2024

Quantification of local matrix deposition during muscle stem cell activation using engineered hydrogels

Pamela Duran, Benjamin A. Yang, Eleanor M. Plaster…·Carlos A. Aguilar

This study quantifies matrix deposition by muscle stem cells during activation using engineered hydrogels and shows it is critical for maintaining stem cell function.

9 citations

mouseexperimental assay

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Cell Biologynpj MicrogravityPeer-reviewedMar 21, 2024

Cellular mechanotransduction of human osteoblasts in microgravity

Nadab H. Wubshet, Grace Cai, Samuel J. Chen…·Allen P. Liu

This study investigates how microgravity affects human fetal osteoblasts by measuring cell mechanics and signaling changes in space compared to ground controls.

17 citations

humanexperimental assay

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