Author

Bieke Vanslembrouck

Lawrence Berkeley National LaboratoryORCID 0000-0001-7994-0967Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cell Biology· 1 Microbiology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Assay:imaging· 3 Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Organism:bacteria (other)· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Organism:yeast· 1

Frequent Co-Authors

Carolyn A. LarabelliD· 2 shared Jian-Hua CheniD· 2 shared Mark A. Le GrosiD· 2 shared Anne DiehliD· 1 shared Anthoula ChatzimpinouiD· 1 shared Axel A. EkmaniD· 1 shared Hartmut OschkinatiD· 1 shared Heather L. StruckmaniD· 1 shared

Activity by Year

2024-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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2 shared papersCell Biology

Carolyn A. LarabellORCID

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3 papers

Recent·Most cited

Cell BiologyMolecular Biology of the CellPeer-reviewedAug 28, 2025

Automated segmentation of soft X-ray tomography: native cellular structure with sub-micron resolution at high throughput for whole-cell quantitative imaging in yeast

Jian-Hua Chen, Mary Mirvis, Axel A. Ekman…·Wallace F. Marshall

This paper introduces an auto-segmentation pipeline for soft X-ray tomography to enable high-throughput, precise 3D morphometric analysis of yeast cells and organelles.

10 citations

yeastimaging

𝕏 PostBluesky

Microbiologynpj Biofilms and MicrobiomesPeer-reviewedFeb 2, 2025

Soft X-ray tomography reveals variations in B.subtilis biofilm structure upon tasA deletion

Anthoula Chatzimpinou, Anne Diehl, Tobias Harhoff…·Venera Weinhardt

This paper uses soft X-ray tomography to analyze B.subtilis biofilm structure, showing structural changes in a tasA deletion mutant and the effect of TasA protein addition.

5 citations

bacteria (other)imaging

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Systems BiologyMicroscopy and MicroanalysisPeer-reviewedFeb 29, 2024

Indirect Correlative Light and Electron Microscopy (iCLEM): A Novel Pipeline for Multiscale Quantification of Structure from Molecules to Organs

Heather L. Struckman, Nicolae Moise, Bieke Vanslembrouck…·Rengasayee Veeraraghavan

The paper introduces iCLEM, a pipeline that correlates multiscale structural data from different imaging modalities using intrinsic fiducials, enabling structure-function relationship discovery.

1 citation

imagingexperimental assay

𝕏 PostBluesky