Author

Michael J. Bullen

Monash UniversityORCID 0000-0001-8509-8235Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:mouse· 3 Assay:ChIP-seq· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Research Focus:benchmarking· 1 Assay:CRISPR screen· 1 Organism:human· 1 Approach:statistical model· 1

Frequent Co-Authors

Partha Pratim DasiD· 3 shared Lee H. WongiD· 2 shared Luca PinelloiD· 2 shared Pratibha Tripathi· 2 shared Stuart H. OrkiniD· 2 shared Yogesh Kumar· 2 shared Alan B. Cantor· 1 shared Alireza Ghamari· 1 shared

Activity by Year

2020-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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3 shared papersGenomics

Partha Pratim DasORCID

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3 papers

Recent·Most cited

Molecular BiologyCell ReportsPeer-reviewedFeb 27, 2024

The apparent loss of PRC2 chromatin occupancy as an artefact of RNA depletion

Evan Healy, Qi Zhang, Emma H. Gail…·Chen Davidovich

The paper shows that RNase A treatment during ChIP-seq falsely reduces PRC2 chromatin occupancy signals, revealing limitations in using this method to study RNA-dependent chromatin regulation.

31 citationstop 5%

mousehuman

𝕏 PostBluesky

GenomicsJournal of Biological ChemistryPeer-reviewedSep 29, 2020

A saturating mutagenesis CRISPR-Cas9 mediated functional genomic screen identifies cis- and trans-regulatory elements of Oct4 in embryonic stem cells

Matthew C. Canver, Pratibha Tripathi, Michael J. Bullen…·Partha Pratim Das

The paper identifies cis- and trans-regulatory elements of Oct4 in mESCs using ctSCAN-SMS, showing CREs are more active and conserved than TREs.

12 citations

mouseCRISPR screen

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GenomicsbioRxivPreprintAug 27, 2020

Histone demethylome map reveals combinatorial gene regulatory functions in embryonic stem cells

Yogesh Kumar, Pratibha Tripathi, Pushkar Dakle…·Partha Pratim Das

The paper identifies combinatorial functions of histone demethylases in gene regulation of mouse embryonic stem cells by analyzing their genome-wide binding patterns.

2 citations

mouseChIP-seq

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