Author

Emily A. Hansen

University of California San DiegoORCID 0000-0001-8540-2807Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:bulk RNA-seq· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Approach:statistical model· 2 Approach:matrix factorization· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Anna S. WardeniD· 2 shared Celina T. NguyeniD· 2 shared Nicole G. CoufaliD· 2 shared Roy Y. KimiD· 2 shared Samantha Trescott· 2 shared Allen WangiD· 1 shared Arjun PateliD· 1 shared Atul MalhotraiD· 1 shared

Activity by Year

2021-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersGenomics

Anna S. WardenORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Profiling Transcription Initiation in Peripheral Leukocytes Reveals Severity-Associated Cis-Regulatory Elements in Critical COVID-19

Michael T. Y. Lam, Sascha H. C. Duttke, Mazen Faris Odish, Hiep Dinh Le, Emily A. Hansen, Celina T. Nguyen, Samantha Trescott, Roy Y. Kim, Shaunak Deota, Max W. Chang, Arjun Patel, Mark Hepokoski, Mona Alotaibi, Mark L. Rolfsen, Katherine Perofsky, , Nicole G. Coufal

The paper profiles the active cistrome in peripheral leukocytes of critically ill COVID-19 patients to identify severity-associated cis-regulatory elements and their regulatory programs.

Cell Reports Medicine · Jan 25, 2023Peer-reviewedGenomics

Gene regulatory networks underlying human microglia maturation

Claudia Z. Han, Rick Z. Li, Emily A. Hansen, Hunter R. Bennett, Olivier Poirion, Justin Buchanan, Jean F. Challacombe, Bethany R. Fixsen, Samantha Trescott, Johannes C. M. Schlachetzki, Sebastian Preißl, Allen Wang, Carolyn O’Connor, Anna S. Warden, Shreya Shriram, , Nicole G. Coufal

This study defines age-specific brain environmental factors driving microglia phenotypes through transcriptomic and epigenomic analysis of human fetal and postnatal microglia.

bioRxiv · Jun 2, 2021 · PreprintGenomics