Author

Hunter R. Bennett

University of California San DiegoORCID 0000-0002-8495-1545Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Research Focus:differential expression· 1 Approach:experimental assay· 1 Organism:human· 1 Approach:matrix factorization· 1 Organism:mouse· 1

Frequent Co-Authors

Christopher K. GlassiD· 2 shared Allen WangiD· 1 shared Anna S. WardeniD· 1 shared Avalon JohnsoniD· 1 shared Bernd SchnabliD· 1 shared Bethany R. Fixsen· 1 shared Carlos GuzmaniD· 1 shared Carolyn O’ConnoriD· 1 shared

Activity by Year

2021-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersGenomics

Christopher K. GlassORCID

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2 papers

Recent·Most cited

Systematic analysis of transcriptional and epigenetic effects of genetic variation in Kupffer cells enables discrimination of cell intrinsic and environment-dependent mechanisms

Hunter R. Bennett, Ty D. Troutman, Enchen Zhou, Nathanael J. Spann, Verena M. Link, Jason S. Seidman, Christian K. Nickl, Yohei Abe, Mashito Sakai, Martina P. Pasillas, Justin M. Marlman, Carlos Guzman, Mojgan Hosseini, Bernd Schnabl, Christopher K. Glass

The paper analyzes how genetic variation affects gene expression and epigenetics in Kupffer cells, distinguishing between cell intrinsic and environment-dependent mechanisms.

bioRxiv · Sep 22, 2022 · PreprintGenomics

Gene regulatory networks underlying human microglia maturation

Claudia Z. Han, Rick Z. Li, Emily A. Hansen, Hunter R. Bennett, Olivier Poirion, Justin Buchanan, Jean F. Challacombe, Bethany R. Fixsen, Samantha Trescott, Johannes C. M. Schlachetzki, Sebastian Preißl, Allen Wang, Carolyn O’Connor, Anna S. Warden, Shreya Shriram, , Nicole G. Coufal

This study defines age-specific brain environmental factors driving microglia phenotypes through transcriptomic and epigenomic analysis of human fetal and postnatal microglia.

bioRxiv · Jun 2, 2021 · PreprintGenomics