Author

Tse-Shun Huang

BioLegend (United States)ORCID 0000-0001-8902-5439Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Research Focus:cell signaling & trafficking· 1 Assay:CITE-seq· 1 Approach:deep learning· 1 Research Focus:development & morphogenesis· 1 Research Focus:differential expression· 1 Organism:human· 1

Frequent Co-Authors

Aaron StreetsiD· 1 shared André Luiz Zorzetto-FernandesiD· 1 shared Aviv RegeviD· 1 shared Bertrand Z. YeungiD· 1 shared Caleb A. LareauiD· 1 shared Can ErgeniD· 1 shared Dominik A. AylardiD· 1 shared Eleni P. MimitouiD· 1 shared

Activity by Year

2020-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperImmunology

Aaron StreetsORCID

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2 papers

Recent·Most cited

Single-cell multi-omic analysis of thymocyte development reveals drivers of CD4/CD8 lineage commitment

Zoë Steier, Dominik A. Aylard, Laura Lynn McIntyre, Isabel Baldwin, Esther Jeong Yoon Kim, Lydia Kay Lutes, Can Ergen, Tse-Shun Huang, Ellen A. Robey, Nir Yosef, Aaron Streets

This study uses CITE-seq to analyze thymocyte development and identifies TCR signaling waves and the TCR/calcineurin/NFAT/GATA3 axis as drivers of CD4/CD8 lineage commitment.

bioRxiv · Jul 12, 2021 · PreprintImmunology

Scalable, multimodal profiling of chromatin accessibility and protein levels in single cells

Eleni P. Mimitou, Caleb A. Lareau, Kelvin Y. Chen, André Luiz Zorzetto-Fernandes, Yusuke Takeshima, Wendy Luo, Tse-Shun Huang, Bertrand Z. Yeung, Pratiksha I. Thakore, James B. Wing, Kristopher L. Nazor, Shimon Sakaguchi, Leif S. Ludwig, Vijay G. Sankaran, Aviv Regev, Peter Smibert

This paper introduces ASAP-seq, a method to simultaneously profile chromatin accessibility, protein levels, and mtDNA in single cells, demonstrating its application in hematopoietic differentiation and T cell perturbations.

bioRxiv · Sep 8, 2020 · PreprintGenomics