Author

Mathieu Chicard

InsermORCID 0000-0002-0697-8611Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Organism:human· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Gudrun SchleiermacheriD· 2 shared Aleš VíchaiD· 1 shared Andries De KokeriD· 1 shared Angela BelliniiD· 1 shared Anne BolandiD· 1 shared Bram De WildeiD· 1 shared Charlotte Vandeputte· 1 shared Derek Oldridge· 1 shared

Activity by Year

2016-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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2 shared papersGenomics

Gudrun SchleiermacherORCID

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2 papers

Recent·Most cited

Minimally invasive classification of pediatric solid tumors using reduced representation bisulfite sequencing of cell-free DNA: a proof-of-principle study

Ruben Van Paemel, Andries De Koker, Charlotte Vandeputte, Lieke M. J. van Zogchel, Tim Lammens, Geneviève Laureys, Jo Vandesompele, Gudrun Schleiermacher, Mathieu Chicard, Nadine Van Roy, Aleš Vícha, Godelieve A.M. Tytgat, Nico Callewaert, Katleen De Preter, Bram De Wilde

This study demonstrates that reduced representation bisulfite sequencing of cell-free DNA can accurately classify pediatric solid tumors with high sensitivity.

Epigenetics · Jul 14, 2020Peer-reviewedGenomics

Clonal assessment of functional mutations in cancer based on a genotype-aware method for clonal reconstruction

Paul Deveau, Leo Colmet Daage, Derek Oldridge, Virginie Bernard, Angela Bellini, Mathieu Chicard, Nathalie Clement, Eve Lapouble, Valérie Combaret, Anne Boland, Vincent Meyer, Jean-François Deleuze, Isabelle Janoueix-Lerosey, Emmanuel Barillot, Olivier Delattre, , Valentina Boeva

The paper introduces QuantumClone, a method for clonal reconstruction in cancer that accounts for variant allele frequencies and genotypes, and applies it to neuroblastoma samples to identify recurrently altered pathways in different clonal populations.

bioRxiv · May 19, 2016Cancer Biology