Author

Michaela Rothová

University of CopenhagenORCID 0000-0002-0835-5143Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:differential expression· 2 Approach:experimental assay· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

Joshua M. BrickmaniD· 2 shared Andrés Gutiérrez-GarcíaiD· 1 shared António M. PalmaiD· 1 shared Eduardo MorenoiD· 1 shared Esha MadaniD· 1 shared Eyal DavidiD· 1 shared Guangzheng WengiD· 1 shared Ido AmitiD· 1 shared

Activity by Year

2022-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersDevelopmental Biology

Joshua M. BrickmanORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Neighbor-specific gene expression revealed from physically interacting cells during mouse embryonic development

Junil Kim, Michaela Rothová, Esha Madan, Siyeon Rhee, Guangzheng Weng, António M. Palma, Linbu Liao, Eyal David, Ido Amit, Morteza Chalabi Hajkarim, Vignesh Vudatha, Andrés Gutiérrez-García, Eduardo Moreno, Robert A. Winn, Jose Trevino, , Kyoung‐Jae Won

The paper introduces PIC-seq to study cell-cell contact-specific gene expression during mouse embryonic development and identifies novel gene expression signatures dependent on neighboring cell types.

Proceedings of the National Academy of Sciences · Jan 3, 2023Peer-reviewedDevelopmental Biology

Expansion of Ventral Foregut Primes the Enhancer Landscape for Organ Specific Differentiation

Yan Fung Wong, Yatendra Kumar, Martin Proks, José Alejandro Romero Herrera, Michaela Rothová, Rita S. Monteiro, Sara Pozzi, Rachel E. Jennings, Neil A. Hanley, Wendy A. Bickmore, Joshua M. Brickman

The paper shows that cell proliferation in human embryonic stem cell-derived endodermal progenitors primes enhancer landscapes for organ-specific differentiation by modulating chromatin accessibility and enhancer decommissioning.

bioRxiv · Apr 11, 2022 · PreprintDevelopmental Biology