Author

Davide Bulgheresi

Human TechnopoleORCID 0000-0002-2108-3429Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Organism:human· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Alessia Valenti· 2 shared Carlo Emanuele VillaiD· 2 shared Cristina CheroniiD· 2 shared Davide CastaldiiD· 2 shared Giuseppe TestaiD· 2 shared Manuel LessiiD· 2 shared Marco Tullio RigoliiD· 2 shared Nicolò CaporaleiD· 2 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersMolecular Biology

Alessia Valenti

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

A molecular cell atlas of endocrine signalling in human neural organoids

Gaja Matassa, Marco Tullio Rigoli, Davide Castaldi, Alessia Valenti, Manuel Lessi, Nicolò Caporale, Sarah Stucchi, Benedetta Muda, Riccardo Nagni, Luca Tommaso Mainardi, Alessandro Melon, Amaia Tintori, Davide Bulgheresi, Michal Kubacki, Sebastiano Trattaro, , Giuseppe Testa

This paper creates a molecular atlas of endocrine signaling in human neural organoids by perturbing seven hormonal pathways and analyzing their effects on neurodevelopment.

bioRxiv · Aug 14, 2025 · PreprintMolecular Biology

Multiplexing cortical brain organoids for the longitudinal dissection of developmental traits at single cell resolution

Nicolò Caporale, Davide Castaldi, Marco Tullio Rigoli, Cristina Cheroni, Alessia Valenti, Sarah Stucchi, Manuel Lessi, Davide Bulgheresi, Sebastiano Trattaro, Martina Pezzali, Alessandro Vitriolo, Alejandro Tobon, Matteo Bonfanti, Dario Ricca, Katharina Schmid, , Giuseppe Testa

The paper develops and validates multiplexing strategies for brain organoids combined with single cell RNA-seq to study neurodevelopmental trajectories across multiple genetic lines.

Nature Methods · Dec 9, 2024Peer-reviewedNeuroscience