Chengzhe Tian

Metabolic mapping of the human solute carrier superfamily

The paper systematically evaluates the metabolic and transcriptional effects of SLC superfamily members, identifying new substrates and functional groups.

Extracellular matrix protein composition dynamically changes during murine forelimb development

This study examines ECM protein composition changes during murine forelimb development using mass spectrometry and BONCAT, revealing dynamic differences in matrisome composition across developmental stages and tissue types.

Multi range ERK responses shape the proliferative trajectory of single cells following oncogene induced senescence

The paper investigates how varying ERK activity levels influence proliferation in cells undergoing oncogene-induced senescence, finding intermediate ERK activity promotes maximal proliferation.

EllipTrack: A Global-Local Cell-Tracking Pipeline for 2D Fluorescence Time-Lapse Microscopy

EllipTrack is a cell-tracking pipeline that improves accuracy in long-term 2D fluorescence time-lapse microscopy by combining global track-linking and local track-correction.

clustifyr: An R package for automated single-cell RNA sequencing cluster classification

clustifyr assigns cell types to scRNA-seq clusters using diverse reference data and provides tools for exploratory analysis.