Author

David Pérez-Pascual

Centre National de la Recherche ScientifiqueORCID 0000-0002-3809-6381Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Microbiology· 2 Immunology· 1

Signature Assays, Organisms & Methods

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Organism:zebrafish· 3 Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Research Focus:host-pathogen & immune response· 2 Research Focus:cell signaling & trafficking· 1 Approach:deep learning· 1 Assay:metagenomics· 1 Assay:proteomics· 1

Frequent Co-Authors

Jean‐Marc GhigoiD· 3 shared Bianca AudrainiD· 2 shared Akshai Janardhana KurupiD· 1 shared Alex A. LemusiD· 1 shared Alex M. ValmiD· 1 shared Alexa J Orsino· 1 shared Camila Garcia-BaudinoiD· 1 shared Carmen Gloria FeijóoiD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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3 shared papersMicrobiology

Jean‐Marc GhigoORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

MicrobiologybioRxivPreprintFeb 27, 2026

Cross hybridization Inference for Phylogenetic Resolution (CIPHR)-FISH enables microbiome imaging with strain level taxonomic resolution

Emmanuel E. Adade, Ruogu Wang, Colin M. Henneberry…·Alex M. Valm

CIPHR-FISH improves microbiome imaging by enabling strain-level taxonomic resolution through machine learning and probe design, revealing spatial community structures in zebrafish.

DOI 10.64898/2026.02.26.708344

zebrafishspatial transcriptomics

𝕏 PostBluesky

MicrobiologymicroLifePeer-reviewedJan 1, 2026

A Chryseobacterium massiliae pore-forming MACPF domain protein mediates intra and interspecies competition against Bacteroides

Bianca Audrain, David Pérez-Pascual, Stanislas Thiriet-Rupert…·Jean‐Marc Ghigo

This study identifies CSAP-1, a MACPF domain protein from Chryseobacterium massiliae, as a broad-spectrum antimicrobial that inhibits Flavobacteriales species and contributes to zebrafish larval protection against Flavobacterium covae.

DOI 10.1093/femsml/uqag019

zebrafishexperimental assay

𝕏 PostBluesky

ImmunologybioRxivPreprintMay 5, 2025

IL-26 from ILCs regulates early-life gut epithelial homeostasis by shaping microbiota composition

Yazan Salloum, Gwendoline Gros, Keinis Quintero-Castillo…·Pedro P. Hernández

This study shows IL-26 from innate lymphoid cells regulates gut epithelial homeostasis by shaping microbiota composition in zebrafish larvae.

DOI 10.1101/2025.05.05.652124

zebrafishproteomics

𝕏 PostBluesky