Author

Yu Shu Huang

University of DundeeORCID 0000-0002-3875-7581Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetics· 3 Bioinformatics· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 4 Assay:GWAS summary statistics· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:eQTL / molecular QTL mapping· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1 Organism:human· 1

Frequent Co-Authors

Colin N. A. PalmeriD· 2 shared Aditya Nar· 1 shared Alex S. F. DoneyiD· 1 shared Allison Furterer· 1 shared Andrew Mark McIntoshiD· 1 shared Anna J. JasinskaiD· 1 shared Aravind Lathika RajendrakumariD· 1 shared Baohua MaiD· 1 shared

Activity by Year

2017-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 10 mutual co-author links

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2 shared papersBioinformatics

Colin N. A. PalmerORCID

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Author profile →

5 papers

Recent·Most cited

Accucopy: Accurate and Fast Inference of Allele-specific Copy Number Alterations from Low-coverage Low-purity Tumor Sequencing Data

Xinping Fan, Guanghao Luo, Yu Shu Huang

Accucopy infers total and allele-specific copy numbers from low-coverage low-purity tumor data, showing higher accuracy than existing methods.

BMC Bioinformatics · Jan 15, 2021Peer-reviewedBioinformatics

PheGWAS: A new dimension to visualize GWAS across multiple phenotypes

Gittu George, Sushrima Gan, Yu Shu Huang, Philip Appleby, Aditya Nar, Radha Venkatesan, Viswanathan Mohan, Colin N A Palmer, Alex S. F. Doney

PheGWAS creates a 3D visualization combining GWAS and PheWAS data to explore pleiotropy across phenotypes, identifying loci and genetic correlations.

Bioinformatics · Dec 18, 2019Peer-reviewedBioinformatics

Genetic correlations between pain phenotypes and depression and neuroticism

Weihua Meng, Mark J. Adams, Parminder Singh Reel, Aravind Lathika Rajendrakumar, Yu Shu Huang, Ian J. Deary, Colin N. A. Palmer, Andrew Mark McIntosh, Blair Hamilton Smith

This study identifies genetic correlations between eight pain phenotypes and depression, major depressive disorders, and neuroticism using UK Biobank data and LDSC methods.

European Journal of Human Genetics · Oct 28, 2019Peer-reviewedGenetics

Base pair editing of goat embryos: nonsense codon introgression into FGF5 to improve cashmere yield

Guanwei Li, Shiwei Zhou, Chao Li, Bei Cai, Honghao Yu, Baohua Ma, Yu Shu Huang, Yige Ding, Yao Liu, Qiang Ding, Chong Z. He, Jiankui Zhou, Ying Wang, Guangxian Zhou, Yan Li, , Xiaolong Wang

This study uses base editing in goat embryos to introduce nonsense mutations in FGF5, improving cashmere yield with minimal off-target effects.

bioRxiv · Jun 15, 2018 · PreprintGenetics

Genetic variation and gene expression across multiple tissues and developmental stages in a non-human primate

Anna J. Jasinska, Ivette Zelaya, Susan K. Service, Christine B. Peterson, Rita M. Cantor, Oi‐Wa Choi, Joseph A. DeYoung, Eleazar Eskin, Lynn A. Fairbanks, Scott C. Fears, Allison Furterer, Yu Shu Huang, Vasily E. Ramensky, Christopher A. Schmitt, Hannes Svardal, , Nelson B. Freimer

The paper generates a transcriptome resource and eQTL catalogue in vervet monkeys, revealing sex and age-related expression patterns and key regulatory loci.

Nature Genetics · Oct 30, 2017Peer-reviewedGenetics