Author

Gerald Burgstaller

Helmholtz MunichORCID 0000-0002-7121-2567Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Systems Biology· 2 Bioengineering· 1 Cell Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Research Focus:differential expression· 3 Organism:mouse· 3 Approach:deep learning· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Research Focus:clustering· 1 Approach:diffusion model· 1

Frequent Co-Authors

Christoph H. MayriD· 3 shared Meshal AnsariiD· 3 shared Ali Önder YildirimiD· 2 shared Fabian Joachim TheisiD· 2 shared Herbert B. SchilleriD· 2 shared Ilias AngelidisiD· 2 shared Jürgen BehriD· 2 shared Laura F. Mattner· 2 shared

Activity by Year

2019-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

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3 shared papersSystems Biology

Christoph H. MayrORCID

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4 papers

Recent·Most cited

A generative AI framework for disease-specific lung microtissue bioengineering

Ella Bahry, Jeanine C. Pestoni, Kai Hirzel, Taras Savchyn, Diana Porras-Gonzalez, V. Getmanchuk-Zaporoshchenko, Martin Gregor, Thomas M. Conlon, Ali Önder Yildirim, Kyle Harrington, Deborah Schmidt, Gerald Burgstaller, Michael Heymann

This paper introduces a generative AI framework for designing and fabricating disease-specific lung microtissues using 3D imaging and bioprinting.

bioRxiv · Apr 16, 2026 · PreprintBioengineering

Single cell decomposition of multicellular aging programs associated with impaired lung regeneration

Janine Gote-Schniering, M. Camila Melo-Narváez, Gowtham Boosarpu, David Lauer, Sai Rama Sridatta Prakki, Huijuan Wang, Matthias Brunner, Simrah Khan, Meshal Ansari, Michael Ammeter, Eshita Jain, Nikola Puda, Konstantin Wiedemann, Carina Steinchen, Sara Ashgapour, , Herbert B. Schiller

The paper uses single-cell RNA-seq to analyze aging effects on lung regeneration, identifying immune cell states linked to impaired progenitor function in aged mice.

bioRxiv · Jul 24, 2025 · PreprintCell Biology

Phosphoproteomics of cellular mechanosensing reveals NFATC4 as a regulator of myofibroblast activity

Laura F. Mattner, Zhen Zeng, Christoph H. Mayr, Meshal Ansari, Xin Chuan Wei, Sara Asgharpour, Anita A. Wasik, Nikolaus Kneidinger, Mircea-Gabriel Stoleriu, Jürgen Behr, Julien Polleux, Ali Önder Yildirim, Gerald Burgstaller, Matthias Mann, Herbert B. Schiller

This study identifies NFATC4 as a regulator of myofibroblast activity through phosphoproteomic analysis of fibroblast mechanosensing on stiffness-modulated substrates.

bioRxiv · Feb 13, 2023 · PreprintSystems Biology

Longitudinal single cell transcriptomics reveals Krt8+ alveolar epithelial progenitors in lung regeneration

Maximilian Strunz, Lukas Mikolaj Simon, Meshal Ansari, Laura F. Mattner, Ilias Angelidis, Christoph H. Mayr, Jaymin J. Kathiriya, Min Yee, Paulina Ogar, Arunima Sengupta, I. V. Kukhtevich, Robert Schneider, Zhongming Zhao, Jens H. L. Neumann, Jürgen Behr, , Herbert B. Schiller

The paper uses single-cell RNA-seq to identify Krt8+ progenitor cells involved in lung regeneration and shows their role in epithelial differentiation and disease.

bioRxiv · Jul 18, 2019 · PreprintSystems Biology