Ella Bahry

Tau spreading coordinates intercellular lipid flux enhancing neuronal resilience to lipid toxicity

This study shows that spreading tau coordinates lipid homeostasis by promoting neuronal lipid efflux and enhancing resilience to lipid toxicity.

Efficient CRISPR/Cas9-mediated homology independent sequence replacement in vivo and non-dividing primary cells

The paper introduces REPLACE, a CRISPR/Cas9-based method for homology-independent sequence replacement in non-dividing cells, achieving efficient gene and exon editing in primary cells and post-mitotic cardiomyocytes.

A generative AI framework for disease-specific lung microtissue bioengineering

This paper introduces a generative AI framework for designing and fabricating disease-specific lung microtissues using 3D imaging and bioprinting.

Analysis of developmental gene expression using smFISH and in silico staging of C. elegans embryos

The paper develops a smFISH method with computational staging to study transcription dynamics in C. elegans embryos and finds that the DCC reduces dpy-23 transcription frequency.

VoltRon: A Spatial Omics Analysis Platform for Multi-Resolution and Multi-omics Integration using Image Registration

VoltRon is an R package for spatial omics analysis that integrates multi-resolution and multi-omics data through image registration and spatial alignment.

RS-FISH: Precise, interactive, fast, and scalable FISH spot detection

RS-FISH detects FISH spots accurately and efficiently in 2D and 3D images, supporting applications like smFISH and spatial genomics.