Ned Peel

City life: airborne DNA metagenomic biodiversity monitoring reveals dynamic changes across time and space

This study uses airborne DNA metagenomics to monitor biodiversity across time and space, revealing seasonal and spatial shifts in species composition.

Decoding the microbiome and resistome of advanced chronic liver disease through long-read metagenomics

This study uses long-read metagenomics to analyze the microbiome and resistome in advanced chronic liver disease, identifying Enterococcus faecium dominance and resistance gene enrichment linked to disease severity.

MARTi: a real-time analysis and visualisation tool for nanopore metagenomics

MARTi provides real-time metagenomic analysis and visualization using open-source tools, supporting classification methods like BLAST and Kraken2 for taxonomic and AMR gene identification.

A Comparison of Nanopore Data Types, Basecalling, and Assembly Algorithms: Whole Plant Genome Assembly and Methylation Analysis from a Single MinION Flow cell

The paper evaluates nanopore sequencing and assembly improvements for Arabidopsis genome assembly and methylation analysis using a single MinION flow cell.

Rapid profiling of the preterm infant gut microbiota using nanopore sequencing aids pathogen diagnostics

This study uses nanopore sequencing to rapidly profile preterm infant gut microbiota, enabling pathogen detection and antimicrobial resistance profiling within one hour.

An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations.