Author
Bing Ye
University of MichiganORCID 0000-0002-8828-4065Unclaimed ORCID profile · follow to get notified of new preprints
Biology Disciplines
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2019-2026 · peak 4/yrCo-Author Collaboration Network
10 top collaborators · 18 mutual co-author links14 papers
Recent·Most cited
- NeuroscienceCurrent BiologyPeer-reviewedDOI 10.1016/j.cub.2026.09.030
- NeurosciencebioRxivPreprint
LabGrymace: Automated Analysis of Mouse Grimace for Quantitative Assessment of Pain Dynamics
Wenjin Dong, Kayla M. Moehn, Elizabeth A. Ronan…·Bing Ye
LabGrymace automates pain assessment in mice by analyzing facial dynamics from video, providing continuous pain scores across different pain types.
- Animal Behavior & CognitionG3 Genes Genomes GeneticsPeer-reviewed
Automated analysis of C. elegans behavior by LabGym: an open-source, AI-powered platform
L Amanda Xu, Hongjiang Liu, Zhaoyu Li…·Elizabeth A. Ronan
The paper introduces LabGym, an open-source AI platform for automated analysis of C. elegans locomotion behavior in multi-worm videos with high accuracy.
DOI 10.1093/g3journal/jkag120 - Animal Behavior & CognitionPLoS BiologyPeer-reviewed
Neurotype matching in monogamous rodents is modulated by early-life sleep experience
Lézio Soares Bueno-Júnior, Noah Milman, Carolyn E. Jones…·Brendon O. Watson
The paper investigates neurotype matching in prairie voles by manipulating early-life sleep experience and uses deep learning to analyze social interactions.
1 citation - NeuroscienceCell ReportsPeer-reviewed
Intradental mechano-nociceptors serve as sentinels that prevent tooth damage
Elizabeth A. Ronan, Akash R. Gandhi, Karin Harumi Uchima Koecklin…·Joshua J. Emrick
This study identifies intradental high-threshold mechano-nociceptors that detect tooth damage, produce pain, and trigger protective reflexes.
10 citationstop 2% - BioengineeringCell Reports MethodsPeer-reviewed
An improved FLARE system for recording and manipulating neuronal activity
Guanwei Zhou, Ruonan Li, Ola Bartolik…·Wenjing Wang
The paper improves the FLARE system to better record and manipulate neuronal activity by enhancing calcium sensitivity and signal-to-background ratio in Drosophila models.
2 citations - NeuroscienceGenes Brain & BehaviorPeer-reviewed
Cognitive behavioral phenotyping of DSCAM heterozygosity as a model for autism spectrum disorder
Ryan C. Neff, Katherine A. Stangis, Ujjawal Beniwal…·Geoffrey G. Murphy
This study shows that DSCAM heterozygosity in mice produces autistic-like behaviors, supporting its role in ASD and suggesting it as a model for research.
9 citations - Animal Behavior & CognitionbioRxivPreprint
Quantifying social roles in multi-animal videos using subject-aware deep-learning
Kelly Goss, Lézio Soares Bueno-Júnior, Katherine A. Stangis…·Yujia Hu
This paper introduces a subject-aware deep-learning system to quantify social roles in multi-animal groups across species and assays.
12 citations - NeurosciencePLoS BiologyPeer-reviewed
Dscam gene triplication causes neocortical overinhibition in Down syndrome
Hao Liu, René N. Caballero-Florán, Ty Hergenreder…·Bing Ye
This study shows that Dscam overexpression in Down syndrome mouse models causes excessive GABAergic inhibition of neocortical pyramidal neurons.
25 citationstop 3% - BioinformaticsNature MethodsPeer-reviewed
BigNeuron: A resource to benchmark and predict best-performing algorithms for automated reconstruction of neuronal morphology
Linus Manubens-Gil, Zhi Zhou, Hanbo Chen…·Hanchuan Peng
BigNeuron benchmarks automatic neuron reconstruction algorithms using gold standard annotations and image quality metrics, showing that consensus methods outperform individual algorithms.
50 citationstop 2% - NeuroscienceNature MethodsPeer-reviewed
Highly sensitive genetically-encoded sensors for population and subcellular imaging of cAMP in vivo
Crystian I Massengill, Landon Bayless-Edwards, César C. Ceballos…·Haining Zhong
The paper develops improved genetically-encoded cAMP sensors, cAMPFIREs, for high-sensitivity in vivo imaging of cAMP dynamics in neurons and Drosophila.
64 citationstop 2% - GeneticsCell ReportsPeer-reviewed
isoTarget: a genetic method for analyzing the functional diversity of splicing isoforms in vivo
Hao Liu, Sarah Pizzano, Ruonan Li…·Bing Ye
The paper introduces isoTarget, a genetic method to block specific splicing isoforms and tag them for analysis, revealing their distinct roles in neuronal development.
11 citations - NeuroscienceDisease Models & MechanismsPeer-reviewed
Frameshift mutations of YPEL3 alter the sensory circuit function in Drosophila
Jung Hwan Kim, Monika Singh, Geng Pan…·Bing Ye
This study shows that a frameshift mutation in YPEL3 in Drosophila reduces nociceptive responses by impairing synaptic connections between nociceptors and second-order neurons.
5 citations - NeuroscienceCell ReportsPeer-reviewed
Identification of neuronal lineages in the Drosophila peripheral nervous system with a novel multi-spectral lineage tracing system
Macy W. Veling, Ye Li, Mike T. Veling…·Dawen Cai
This study introduces Lineage Tracker Bitbow, a multi-spectral lineage tracing system for Drosophila, and uses it to map neuronal lineages and analyze cis-regulatory elements in lineage-specific gene expression.
20 citations