Author

Ryan Ard

University of CopenhagenORCID 0000-0002-9070-9747Unclaimed ORCID profile · follow to get notified of new preprints

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Ryan Ard1 paper

Biology Disciplines

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Research Focus:gene regulatory network inference· 4 Assay:DNA methylation· 3 Approach:experimental assay· 3 Approach:statistical model· 3 Organism:Arabidopsis· 2 Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2

Frequent Co-Authors

Sebastian MarquardtiD· 3 shared Maxim IvanoviD· 2 shared Peter KindgreniD· 2 shared Vicent PelechanoiD· 2 shared Alison L. PidouxiD· 1 shared Bingnan LiiD· 1 shared Carolin A. MülleriD· 1 shared Conrad A. NieduszynskiiD· 1 shared

Activity by Year

2018-2020 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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3 shared papersGenomics

Sebastian MarquardtORCID

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4 papers

Recent·Most cited

GenomicsNature CommunicationsPeer-reviewedMay 22, 2020

Transcript isoform sequencing reveals widespread promoter-proximal transcriptional termination

Quentin Angelo Thomas, Ryan Ard, Jinghan Liu…·Sebastian Marquardt

The paper uses TIF-seq to identify TSS/PAS pairs in Arabidopsis, revealing widespread promoter-proximal transcriptional termination through sppRNAs.

63 citationstop 4%

Arabidopsisbulk RNA-seq

𝕏 PostBluesky

GenomicsNature CommunicationsPeer-reviewedMay 28, 2019

Inter-species conservation of organisation and function between non-homologous regional centromeres

Pin Tong, Alison L. Pidoux, Nicholas R. T. Toda…·Robin C. Allshire

The paper shows that centromere DNA from non-homologous fission yeast species can be recognized and function across species, despite lacking sequence conservation.

40 citations

yeastDNA methylation

𝕏 PostBluesky

GenomicsPLoS GeneticsPeer-reviewedFeb 1, 2019

Transcription-driven Chromatin Repression of Intragenic Promoters

Mathias Nielsen, Ryan Ard, Xueyuan Leng…·Sebastian Marquardt

The paper investigates how RNAPII transcription represses intragenic promoters in plants by altering chromatin signatures and requiring the FACT complex.

91 citationstop 3%

plant (other)DNA methylation

𝕏 PostBluesky

GenomicsNature CommunicationsPeer-reviewedOct 26, 2018

Transcriptional read-through of the long non-coding RNA SVALKA governs plant cold acclimation

Peter Kindgren, Ryan Ard, Maxim Ivanov, Sebastian Marquardt

This study identifies the lncRNA SVALKA and its read-through transcript asCBF1, showing they regulate CBF1 expression and freezing tolerance in Arabidopsis during cold acclimation.

257 citationstop 1%

ArabidopsisDNA methylation

𝕏 PostBluesky