Author

Shilpa Narina

St. Jude Children's Research HospitalORCID 0000-0002-9952-1302Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cell Biology· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Assay:ATAC-seq· 1 Research Focus:cancer & tumor microenvironment· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Research Focus:dimensionality reduction· 1

Frequent Co-Authors

Shondra M. Pruett‐MilleriD· 2 shared Alexander C. MonovichiD· 1 shared Alexandre F. CariseyiD· 1 shared Brennan P. BergeroniD· 1 shared Charles Grenfell MullighaniD· 1 shared Chi‐Lun ChangiD· 1 shared Ching‐Hon PuiiD· 1 shared Christopher S. ManringiD· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersCell Biology

Shondra M. Pruett‐MillerORCID

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2 papers

Recent·Most cited

ER-to-Golgi Trafficking is a Nutrient-Sensitive Checkpoint Linking Glucose Starvation to Cell Surface Remodeling

Joung Hyuck Joo, William Kasberg, Spencer Douglas, Uwemedimo G. Udoh, Alexandre F. Carisey, James Messing, Yong‐Dong Wang, Shilpa Narina, Shondra M. Pruett‐Miller, Myriam Labelle, Jennifer Lippincott‐Schwartz, Chi‐Lun Chang, Mondira Kundu

The paper shows glucose starvation impairs ER-to-Golgi trafficking, reducing surface proteins like E-cadherin and promoting metastasis through AMPK and ULK1 signaling.

bioRxiv · Oct 31, 2025 · PreprintCell Biology

Epigenomic mapping in B-cell acute lymphoblastic leukemia identifies transcriptional regulators and noncoding variants promoting distinct chromatin architectures

Kelly R. Barnett, Robert J. Mobley, Jonathan D. Diedrich, Brennan P. Bergeron, Kashi Raj Bhattarai, Alexander C. Monovich, Shilpa Narina, Wenjian Yang, Kristine R. Crews, Christopher S. Manring, Elias Joseph Jabbour, Elisabeth M. Paietta, Mark Robert Litzow, Steven Mitchell Kornblau, Wendy Stock, , Daniel Savic

The paper maps chromatin accessibility in B-ALL subtypes using ATAC-seq, identifies TFs and genetic variants influencing chromatin architecture and gene regulation.

Cell Genomics · Nov 20, 2023Peer-reviewedGenomics