Soumitra Pal

The paper identifies sex-specific allometric strategies in Drosophila organs, showing how cell size and number differ between sexes to drive body size differences.

The paper models gene expression adaptation in tumor subclones using stochastic processes and finds non-genetic mechanisms drive subclonal evolution and treatment response.

The paper investigates how somatic Transformer and sex chromosome karyotype pathways regulate gene expression during Drosophila gonad development, showing their combined and exclusive effects on germ cell development.

The paper provides single nucleus and single cell RNA-seq data from Drosophila testes to study spermatogenesis, identifying rare cell types and developmental transitions.

The paper creates a single-cell transcriptomic atlas of the adult fruit fly, identifying over 250 cell types and analyzing gene signatures and sexual dimorphism across tissues.

The paper introduces JUDI, a bioinformatics pipeline framework that reduces scripting effort for parameterized workflows by leveraging DBMS principles, demonstrating a fivefold reduction in scripting for HT-SELEX data analysis.

Co-SELECT identifies DNA shape's non-specific contribution to TF binding in vitro by analyzing HT-SELEX experiments, showing shape features can drive weak binding even without sequence motif similarity.