Author

Lou Bergogne

InsermORCID 0009-0004-9409-0154Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Organism:human· 2 Assay:proteomics· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Research Focus:cell-cell communication· 1 Research Focus:database / resource· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Andreas ZanzoniiD· 3 shared Christine BruniD· 2 shared Jaime Fernandez-MacgregoriD· 2 shared Luana LicataiD· 2 shared Marta IannuccelliiD· 2 shared Achille BroggiiD· 1 shared Alessia PintoiD· 1 shared Aurélie BergoniD· 1 shared

Activity by Year

2026-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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3 shared papersBioinformatics

Andreas ZanzoniORCID

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3 papers

Recent·Most cited

Capturing domain-level detail of molecular interactions in the IMEx Consortium binding domain data set

Alessia Pinto, Prisca Lo Surdo, Juan Jose Medina Reyes, Lou Bergogne, Carla Luciana Padilla Franzotti, Marta Iannuccelli, Simona Panni, Kalpana Panneerselvam, Sylvie Ricard‐Blum, Eliot Ragueneau, Sandra E. Orchard, Henning Hermjakob, Andreas Zanzoni, Luana Licata

The paper presents a manually curated dataset of protein binding domains, linking them to molecular interactions and genomic variations for benchmarking and disease mechanism studies.

bioRxiv · Oct 16, 2026 · PreprintBioinformatics

A quantitative interactome map reveals affinity tailored hijacking of human cellular functions by resident and pathogenic bacteria

Jaime Fernandez-Macgregor, Laura Ilari, Fabien Durbesson, Stéphane Audebert, Luc Camoin, Bastien Morlet, Virginie Millet, Jean Michel Dela Vedova-Costa, Charlene Gaedke, Vincent Kourilsky, Lou Bergogne, Eric Martínez, Achille Broggi, Jean‐Paul Borg, Søren Østergaard, , Renaud Vincentelli

The paper reports a large-scale quantitative interactome of human PDZ domains and bacterial PDZ-binding motifs, showing bacteria tailor effector sequences to bind with similar or higher affinity than human PBMs to hijack host functions.

bioRxiv · Oct 5, 2026 · PreprintSystems Biology

BactMentha: a database of annotated bacteria-host protein interactions

Lou Bergogne, Mégane Boujeant, Marta Iannuccelli, Aurélie Bergon, Jaime Fernandez-Macgregor, Christine Brun, Luana Licata, Andreas Zanzoni

BactMentha is a database of annotated bacteria-host protein interactions for human, mouse, and rat, including virulence proteins and predicted interaction interfaces.

bioRxiv · Oct 5, 2026 · PreprintBioinformatics