bioRxivPharmacology & ToxicologyPreprint
Investigating BPDE-induced embryonic toxicity employing hiPSC-based models
Vanessa Cristina Meira de Amorim, Leon-Phillip SzepanowskiiD, Alessia LofranoiD, Christiane LoerchiD, Wasco WruckiD, Nina GraffmanniD, James AdjayeiD
Abstract
Benzo[a]pyrene diol epoxide (BPDE) is a metabolite of the environmental contaminant Benzo[a]pyrene- a byproduct of incomplete combustion of organic matter. BPDE reacts with DNA to form BPDE-DNA bulky adducts which if not removed can lead to mutations due to DNA base-pair substitutions. While the effects of BPDE on somatic cells are fairly well described, its effects on early human development are currently unknown. In this study, we investigated for the first time the effect of BPDE on human induced pluripotent stem cells (hiPSCs) and their differentiated neuroprogenitor cells (NPCs) as a model for early embryonic development. Furthermore, we compared hiPSCs and NPCs derived from cells of patients suffering from Nijmegen Breakage Syndrome (NBS), which is a chromosomal instability disorder characterized by defective DNA repair and increased risk of malignancies. Transcriptome analysis, coupled with protein content analysis employing immunostaining and Western blots, revealed that hiPSCs are more sensitive to BPDE exposure when compared to NPCs with an enhanced expression of several genes associated with p53-mediated DNA damage response, including DNA repair by lesion bypass, cell cycle checkpoints and extrinsic apoptosis. We also identified that cells from NBS patients showed less apoptotic response and a distinct p53 response than their healthy counterparts. This iPSC-based study enhances our meagre knowledge of the effects of BPDE on early human development in both healthy individuals and NBS patients. Furthermore, our model conforms with the 3Rs principle.
- organism: human
- assay: bulk RNA-seq
- research focus: cell type annotation
- research focus: differential expression
- approach: experimental assay
- Citations
- 1
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Human CSB-deficient iPSCs exhibit impaired DNA damage repair and stress responses following BPDE exposure in an early developmental model.
Alessia Lofrano, Wasco Wruck, … James Adjaye·bioRxiv·Dec 4, 2025
- Benzopyrene-induced AHR activation in human ESCs primes premature neurogenesis in brain organoids
Bohyeon Jeong, Lei Yang, … Young-Goo Han·bioRxiv·May 5, 2026
- Canonical autophagy remains inactive in induced pluripotent stem cells and neuronal progenitor cells following DNA damage induced by BPDE or etoposide.
Seda Akgün, Padmashri Naren, … Björn Stork·Scientific ReportsPeer-reviewed·Jun 8, 2026
- Endocrine disruptor-induced epimutagenesis in vitro: Insight into molecular mechanisms
Jake D. Lehle, Yu-Huey Lin, … John Robert McCarrey·eLifePeer-reviewed·Oct 3, 2024
- Development of a network formation assay for developmental neurotoxicity hazard screening using 3D human iPSC derived BrainSpheres
S. Boyd, M Mayil Vahanan, … Timothy J. Shafer·NeuroToxicologyPeer-reviewed·Oct 15, 2025
- Bisphenol S moderately decreases the expression of syncytiotrophoblast marker genes and induces apoptosis in human trophoblast lineages.
E. A. Adu-Gyamfi, J. Salamah, … B.-K. Lee·bioRxiv·Oct 19, 2023