bioRxivCancer BiologyPreprint
Sulforaphane modulates microRNA expression in colon cancer cells to implicate the regulation of oncogenes CDC25A, HMGA2 and MYC
Christopher A. Dacosta, Claudia Paicu, Irina Mohorianu, Wei Wang, Ping XuiD, Tamas Dalmay, Yongping Bao
Abstract
Colorectal cancer is an increasingly important cause of morbidity and mortality, whose incidence is associated with dietary and lifestyle factors, particularly inversely so with the consumption of cruciferous vegetables. These vegetables contain glucosinolates, from the breakdown of which are derived isothiocyanates, such as sulforaphane. Sulforaphane is well-characterised for wide-ranging tumour-suppressive and chemoprotective activities in vitro, yet deeper elucidation of its biological interactions would aid in better realising its potential in chemoprevention and/or chemotherapy. There is evidence to suggest that sulforaphane modulates microRNA expression in the colon, thus implying the potential for microRNA modulation to play a role in the anti-cancer effects of sulforaphane. Therefore, the effects of sulforaphane on microRNA expression profiles in the colonic adenocarcinoma Caco-2 and non-cancerous colonic CCD-841 cell lines were investigated by small RNA cloning and deep sequencing, followed by Northern Blot validation experiments. Sulforaphane upregulated let-7f-5p and let-7g-5p expression at 24 h in Caco-2 cells, but not in CCD-841. Such treatment also downregulated miR-29b-3p in Caco-2. Dual luciferase assays with a let-7f-5p mimic and inhibitor confirmed the binding of the miRNA to predicted binding sites in the mRNA transcript 3-UTRs of cell division cycle 25A (CDC25A), high-mobility group AT-hook-2 (HMGA2) and MYC. Therefore, we hypothesize that let-7f-5p translationally represses CDC25A, HMGA2 and MYC, thereby playing a role in the tumour-suppressive effects of sulforaphane. The apparent selectivity of let-7f-5p induction towards tumour cells would be therapeutically desirable if applicable in vivo. MiR-29b-3p is predicted to target a number of tumour-suppressing genes, further investigation of which could be informative regarding the potential of sulforaphane to suppress tumour progression.
- organism: human
- assay: bulk RNA-seq
- research focus: differential expression
- approach: experimental assay
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Paradoxical tumor suppressive role of the musculoaponeurotic fibrosarcoma gene in colorectal cancer
Hiroaki Itakura, Tsuyoshi Hata, … Hirofumi Yamamoto·bioRxiv·Aug 25, 2022
- Focused screening reveals functional effects of microRNAs differentially expressed in colorectal cancer
D. Sastre, J. Baiochi, … R. A. Panepucci·bioRxiv·Apr 10, 2019
- Gut microbiome derived folate metabolite suppresses colorectal cancer progression
Rebecca Danner, Juyeong Cho, … Snehal N. Chaudhari·bioRxiv·Jul 15, 2026
- MicroRNA-451a regulates colorectal cancer radiosensitivity
- STAT6 mRNA and protein knockdown using multiple siRNA sequences inhibits proliferation and induces apoptosis of the human colon adenocarcinoma cell line, HT-29
C. Salguero Aranda, D. Sancho Mensat, … L. Chapman·bioRxiv·Nov 5, 2018
- Regulations of expressions of rat/human sulfotransferases (SULTs) by anti-cancer drug, nolatrexed and micronutrients.
S. Maiti, S. MaitiDutta, G. Chen·bioRxiv·Apr 19, 2020