bioRxivCell BiologyPreprint
T-World: A highly general computational model of a human ventricular myocyte
Jakub TomekiD, Xin ZhouiD, Hector Martinez‐NavarroiD, Maxx HolmesiD, Thomas M. BuryiD, Lucas Arantes BergiD, Markéta TomkováiD, Emily Jo, Norbert NagyiD, Ambre BertrandiD, Alfonso Bueno‐OrovioiD, Michael A. ColmaniD, Blanca RodrígueziD, Donald M. BersiD, Jordi HeijmaniD
Abstract
Cardiovascular disease is the leading cause of death, demanding new tools to improve mechanistic understanding and overcome limitations of stem cell and animal-based research. We introduce T-World, a highly general virtual model of human ventricular cardiomyocyte suitable for multiscale studies. T-World shows comprehensive agreement with human physiology, from electrical activation to contraction, and is the first to replicate all key cellular mechanisms driving life-threatening arrhythmias. Extensively validated on unseen data, it demonstrates strong predictivity across applications and scales. Using T-World we revealed a likely sex-specific arrhythmia risk in females related to restitution properties, identified arrhythmia drivers in type 2 diabetes, and describe unexpected pro-arrhythmic role of NaV1.8 in heart failure. T-World demonstrates strong performance in predicting drug-induced arrhythmia risk and opens new opportunities for predicting and explaining drug efficacy, demonstrated by unpicking effects of mexiletine in Long QT syndrome 2. T-World is available as open-source code and an online app.
- organism: human
- assay: electrophysiology
- research focus: drug response / drug discovery
- research focus: cell type annotation
- research focus: differential expression
- approach: deep learning
- approach: statistical model
- Citations
- 3
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