Cell ReportsImmunologyPeer-reviewed journal article
Distinct causes of three phenotypic hallmarks of hematopoietic aging
Dennis J. ChiaiD, Apeksha SinghiD, Yusheng LiniD, Noa PopkoiD, David Mastro, Yi Liu, Tiffany M. TraniD, Jennifer K. KingiD, Dinesh S. RaoiD, Alexander HoffmanniD
Abstract
Hematopoietic aging is characterized by chronic inflammation associated with myeloid bias, HSC accumulation, and functional HSC impairment. Yet it remains unclear how inflammation promotes these aging phenotypes. NF{kappa}B both responds to and directs inflammation, and we present an experimental model of elevated NF{kappa}B activity ("I{kappa}B-") to dissect its role in hematopoietic aging phenotypes. We found that while elevated NF{kappa}B activity is not sufficient for HSC accumulation, HSC-autonomous NF{kappa}B activity impairs their functionality, leading to reduced bone marrow reconstitution. In contrast, myeloid bias is driven by the I{kappa}B- proinflammatory bone marrow milieu as observed functionally, epigenomically, and transcriptomically. A new scRNA-seq HSPC labeling framework enabled comparisons with aged murine and human HSC datasets, documenting an association between HSC-intrinsic NF{kappa}B activity and quiescence, but not myeloid bias. These findings delineate separate regulatory mechanisms that underlie the three hallmarks of hematopoietic aging, suggesting that they are specifically and independently therapeutically targetable. SummaryAging is associated with inflammation and three hallmark hematopoietic dysfunctions. Using mouse models and single-cell analyses we report that each has a different cause: HSC accumulation is NF{kappa}B-independent, HSC functional impairment is driven by NF{kappa}B within HSCs, and myeloid bias is driven by the NF{kappa}B-altered milieu.
- organism: mouse
- assay: scRNA-seq
- research focus: cell type annotation
- research focus: differential expression
- approach: experimental assay
- approach: statistical model
- Citations
- 9
- FWCI
- 6.65
- Field percentile
- top 3%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Stromal inflammation is a targetable driver of hematopoietic aging
E. V. Verovskaya, C. A. Mitchell, … E. Passegue·bioRxiv·Mar 8, 2021
- Impaired IL-10 Receptor Signaling Leads to Inflammation Induced Exhaustion in Hematopoietic Stem Cells
William Lucas P Wadley, Helen Q. Huang, … Angela G. Fleischman·bioRxiv·Sep 30, 2025
- Hematopoietic stem cells fail to regenerate following inflammatory challenge.
R. Bogeska, P. Kaschutnig, … M. D. Milsom·bioRxiv·Aug 1, 2020
- Heterogeneous Responses of Hematopoietic Stem Cells to Inflammatory Stimuli are Altered with Age
M. Mann, A. Mehta, … D. Baltimore·bioRxiv·Nov 14, 2017
- Aging is associated with functional and molecular changes in distinct hematopoietic stem cell subsets
E. Somuncular, J. Hauenstein, … S. Luc·bioRxiv·Aug 8, 2023
- An Inflammatory and Quiescent HSC Subpopulation Expands with Age in Humans
Ksenia R. Safina, Basit Salik, … Peter van Galen·Genome biologyPeer-reviewed·Jan 16, 2026