bioRxivCancer BiologyPreprint
ProMPt: A modular preclinical platform for functional modelling of prostate cancer heterogeneity and therapeutic vulnerabilities
Nicole PandelliD, Jacob HousehamiD, Matteo Tartagni, Archana P. ThankamonyiD, Florian GabeliD, Roberto Rota, Elizabeth Flittner, Bora GüreliD, Ines FigueiredoiD, George SeediD, Antje NeebiD, Mary Chol, Wei YuaniD, John G. ClohessyiD, Christopher J. TapeiD, Adam SharpiD, Johann Sebastian De BonoiD, Marco BezziiD
Abstract
Prostate cancer progression is driven by heterogenous genetic, phenotypic, and microenvironmental programs that remain challenging to model experimentally. Existing systems such as genetically engineered mouse models, xenografts, and patient-derived organoids have each advanced mechanistic insight but are limited by genetic scope, scalability, or lack of immune context. To overcome these constraints we developed ProMPt, a genetically-defined syngeneic mouse modelling platform that captures combinations of the most recurrent clinical prostate cancer genomic alterations to enable scalable in vitro and in vivo interrogation of prostate cancer evolution. Tumours derived from ProMPt organoids recapitulate the histologic and molecular diversity of human disease. Cross - species transcriptomic integration and multivariate single-cell analysis under defined culture permutations revealed conserved phenoscapes, highlighting a central role for MYC in disease progression and therapy resistance. Guided by these insights, preclinical intervention studies demonstrated that combined MAPK inhibition and blockade of protein translation synergistically suppressed tumour growth in castration-resistant models. This combination not only suppressed proliferation but also remodelled the tumour immune landscape, underscoring its dual epithelial and microenvironmental effects. Together, these findings establish ProMPt as a versatile framework for linking genotype, lineage plasticity, and therapeutic vulnerability in prostate cancer.
- organism: mouse
- assay: spatial transcriptomics
- assay: bulk RNA-seq
- research focus: cell type annotation
- research focus: differential expression
- research focus: drug response / drug discovery
- approach: experimental assay
- Citations
- 1
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Integrative analysis of the MD Anderson Prostate Cancer Patient-Derived Xenograft Series (MDA PCa PDX)
N. Anselmino, E. Labanca, … N. M. Navone·bioRxiv·Jul 21, 2022
- Biobank of genetically defined murine prostate cancer tumoroids uncovers oncogenic pathways and drug vulnerabilities driven by PTEN-loss
Jessica Kalla, Thomas Dillinger, … Gerda Egger·Cell Reports MethodsPeer-reviewed·Mar 30, 2026
- Convergent alterations in the tumor microenvironment of MYC-driven human and murine prostate cancer
M. K. Graham, R. Wang, … S. Yegnasubramanian·bioRxiv·Sep 7, 2023
- A modular patient-derived organoid-xenograft platform reveals molecular and clinical trajectories of prostate cancer progression
Romuald Parmentier, Robin Dolgos, … Clémentine Le Magnen·bioRxiv·Jan 5, 2026
- Distinct mesenchymal cell states mediate prostate cancer progression
- Human iPSC-derived prostate organoids with germline BRCA2 mutation undergo tumorigenic transformations
Bipul R. Acharya, George M. Lawless, … Clive N. Svendsen·bioRxiv·Aug 26, 2025