Developmental CellNeurosciencePeer-reviewed journal article
Single-cell transcriptomic profiling of progenitors of the oligodendrocyte lineage reveals transcriptional convergence during development
Sueli MarquesiD, Darya VanichkinaiD, David van BruggeniD, Elisa M. FloriddiaiD, Hermany MungubaiD, Leif Väremo, Stefania GiacomelloiD, Ana Mendanha FalcãoiD, Mandy MeijeriD, Samudyata SamudyataiD, Simone CodeluppiiD, Åsa K. BjörklundiD, Sten LinnarssoniD, Jens Hjerling‐LeffleriD, Ryan J. TaftiD, Gonçalo Castelo‐BrancoiD
- Citations
- 290
- FWCI
- 10.50
- Field percentile
- top 1%
Abstract
Pdgfra+ oligodendrocyte precursor cells (OPCs) arise in distinct specification waves during embryogenesis in the central nervous system (CNS). It is unclear whether there is a correlation between these waves and different transcriptional oligodendrocyte (OL) states at adult stages. Here we present a bulk and single-cell transcriptomics resource providing insights on how transitions between these states occur. We show that E13.5 Pdgfra+ populations are not OPCs, exhibiting instead hallmarks of neural progenitors. A subset of these progenitors, which we refer as pre-OPCs, rewires their transcriptional landscape, converging into indistinguishable OPC states at E17.5 and post-natal stages. P7 brain and spinal cord OPCs present similar transcriptional profiles at the single-cell level, indicating that OPC states are not region-specific. Postnatal OPC progeny of E13.5 Pdgfra+ have electrophysiological and transcriptional profiles similar to OPCs derived from subsequent specification waves. In addition, lineage tracing indicates that a subset of E13.5 Pdgfra+ cells also originate cells of the pericyte lineage. In summary, our results indicate that embryonic Pdgfra+ cells are diverse and give rise at post-natal stages to distinct cell lineages, including OPCs with convergent transcriptional profiles in different CNS regions.
- organism: mouse
- assay: scRNA-seq
- research focus: cell type annotation
- research focus: clustering
- research focus: differential expression
- research focus: trajectory inference
- approach: statistical model
- approach: experimental assay
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Single-Cell Transcriptomic Analysis Reveals Molecular Diversity of Human Oligodendrocyte Progenitor Cells
Xitiz Chamling, Alyssa Kallman, … Donald J. Zack·bioRxiv·Oct 7, 2020
- Transcriptional Heterogeneity Reveals a Synaptic Gene Program in Developing and Adult Human Oligodendrocyte Precursor Cells
Aliya R. Grinberg, Li Liu, … Hiroko Nobuta·bioRxiv·Jan 2, 2026
- Temporal single-cell transcriptomes of zebrafish spinal cord pMN progenitors reveal distinct neuronal and glial progenitor populations
Kayt Scott, Rebecca O’Rourke, … Bruce Appel·Developmental BiologyPeer-reviewed·Jul 23, 2021
- Developmental landscape of human forebrain at a single-cell level unveils early waves of oligodendrogenesis
David van Bruggen, Fabio Baldivia Pohl, … Gonçalo Castelo‐Branco·Developmental CellPeer-reviewed·May 5, 2022
- Oligodendrocytes in the mouse optic nerve originate in the preoptic area
Katsuhiko Ono, Kengo Yoshii, … Kazuhiro Ikenaka·Brain Structure and FunctionPeer-reviewed·Mar 14, 2017
- Resolving the transcriptional transitions associated with oligodendrocyte generation from adult neural stem cells by single cell sequencing
Kasum Azim, Filippo Calzolari, … Patrick Küry·bioRxiv·Dec 18, 2020