Author

A. A. Makarov

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 3 Biophysics· 2

Signature Assays, Organisms & Methods

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Approach:experimental assay· 5 Assay:proteomics· 2 Research Focus:benchmarking· 1 Assay:cryo-EM· 1 Organism:mouse· 1 Research Focus:protein folding & dynamics· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

A. Botman· 1 shared A. C. Kitchener· 1 shared A. J. R. Heck· 1 shared A. Konijnenberg· 1 shared A. L. Chernobrovkin· 1 shared A. Onur· 1 shared A. S. Dibavar· 1 shared A. S. Rustenburg· 1 shared

Activity by Year

2018-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 7 mutual co-author links

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1 shared paperBiochemistry

A. Botman

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Author profile →

5 papers

Recent·Most cited

Cryo-EM of soft-landed β-galactosidase: Gas-phase and native structures are remarkably similar

T. K. Esser, J. Boehning, A. Onur, D. K. Chinthapalli, L. Eriksson, M. Grabarics, P. Fremdling, A. Konijnenberg, A. A. Makarov, A. Botman, C. Peter, J. L. P. Benesch, C. V. Robinson, J. Gault, L. Baker, , S. Rauschenbach

The paper uses cryo-EM to determine the gas-phase structure of β-galactosidase at 2.6 Å resolution, showing structural similarity to its native state.

bioRxiv · Aug 17, 2023 · PreprintBiochemistry

Abnormal (hydroxy)prolines deuterium content redefines hydrogen chemical mass

H. Gharibi, A. L. Chernobrovkin, G. Eriksson, A. S. Dibavar, Z. Timmons, A. C. Kitchener, D. Kalthoff, K. Liden, A. A. Makarov, R. Zubarev

The paper finds unexpectedly high deuterium levels in proline and hydroxyproline residues of seal bone collagen, challenging assumptions about diet and environmental influences on isotopic signatures.

bioRxiv · Nov 11, 2021Biochemistry

Frequency chasing of individual megadalton ions in an Orbitrap analyzer improves precision of analysis in single molecule mass spectrometry

T. P. Woerner, K. Aizikov, J. Snijder, K. L. Fort, A. A. Makarov, A. J. R. Heck

This study improves mass spectrometry precision by tracking ion frequency drift in high-mass ions, achieving better resolution and sampling through desolvation correction.

bioRxiv · Jun 15, 2021Biophysics

Multiplexed Single Ion Mass Spectrometry Improves Measurement of Proteoforms and Their Complexes

J. O. Kafader, R. D. Melani, K. R. Durbin, B. Ikwuagwu, B. P. Early, R. T. Fellers, S. C. Beu, V. Zabrouskov, A. A. Makarov, J. T. Maze, D. L. Shinholt, P. F. Yip, D. Tullman-Ereck, M. W. Senko, P. D. Compton, N. L. Kelleher

This paper introduces a new Orbitrap-based single ion analysis method that improves the measurement of proteoforms and their complexes by directly determining ion charge.

bioRxiv · Jul 26, 2019 · PreprintBiochemistry

pKa measurements for the SAMPL6 prediction challenge for a set of kinase inhibitor-like fragments

M. Isık, D. Levorse, A. S. Rustenburg, I. E. Ndukwe, H. Wang, X. Wang, M. Reibarkh, G. E. Martin, A. A. Makarov, D. L. Mobley, T. Rhodes, J. D. Chodera

The paper evaluates pKa prediction methods using a dataset of kinase inhibitor-like fragments measured by UV absorbance and NMR.

bioRxiv · Sep 25, 2018Biophysics