Author

Andrew S. Kohlway

10X Genomics (United States)

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 3 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Approach:experimental assay· 3 Organism:human· 3 Research Focus:clustering· 2 Assay:scATAC-seq· 2 Assay:scRNA-seq· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Caleb A. LareauiD· 3 shared Fabiana M. DuarteiD· 2 shared Jason Daniel BuenrostroiD· 2 shared Jennifer G. Chew· 2 shared Paul E. LundiD· 2 shared Ronald LebofskyiD· 2 shared Vinay K. KarthaiD· 2 shared Zach D. BurkettiD· 2 shared

Activity by Year

2019-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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3 shared papersGenomics

Caleb A. LareauORCID

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4 papers

Recent·Most cited

Scalable genotyping in fixed transcriptomes resolves clonal heterogeneity via single-cell sequencing

Sydney B. Blattman, Nabih Maslah, Austin Varela, Karolis Kumpaitis, Benan N. Nalbant, Catherine Snopkowski, Marisa Mariani, Laura C. Kida, Meril T. Takizawa, Nalin Ratnayeke, Kenny Kwok Hei Yu, Sunjay Fernandes, Nima Mousavi, Erik Borgström, Derek Vallejo, , Caleb A. Lareau

GIFT enables high-accuracy genotyping in single cells, revealing mutation-dependent hematopoietic responses in MPN patients.

bioRxiv · Jul 3, 2026 · PreprintGenomics

snPATHO-seq: unlocking the pathology archives

Taopeng Wang, Kate Harvey, Javier Escudero Morlanes, Beata Kiedik, Ghamdan Al‐Eryani, Alissa Greenwald, Nikolaos Kalavros, Felipe Segato Dezem, Yuling Ma, Yered H. Pita-Juárez, Kellie Wise, Cyril Dégletagne, Anna Elz, Azi Hadadianpour, John B. Johanneson, , Luciano Gastón Martelotto

This study introduces a method to generate high-quality single-nucleus transcriptomic data from FFPE samples using recent single-cell genomic technology.

bioRxiv · Dec 7, 2023 · PreprintMolecular Biology

Functional Inference of Gene Regulation using Single-Cell Multi-Omics

Vinay K. Kartha, Fabiana M. Duarte, Yan Hu, Sai Ma, Jennifer G. Chew, Caleb A. Lareau, Andrew Earl, Zach D. Burkett, Andrew S. Kohlway, Ronald Lebofsky, Jason Daniel Buenrostro

This paper develops FigR, a framework to integrate scATAC-seq and scRNA-seq data to infer gene regulatory networks and identify TF regulators in immune responses.

Cell Genomics · Aug 4, 2022Peer-reviewedGenomics

Droplet-based combinatorial indexing for massive scale single-cell epigenomics

Caleb A. Lareau, Fabiana M. Duarte, Jennifer G. Chew, Vinay K. Kartha, Zach D. Burkett, Andrew S. Kohlway, Dmitry Pokholok, Martin J. Aryee, Frank J. Steemers, Ronald Lebofsky, Jason Daniel Buenrostro

The paper introduces a droplet-based combinatorial indexing method for high-throughput scATAC-seq, enabling large-scale single-cell chromatin accessibility profiling in mouse and human cells.

bioRxiv · Apr 18, 2019 · PreprintGenomics