Author

E. Porta-Pardo

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2 Biophysics· 1 Cell Biology· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Organism:human· 4 Approach:statistical model· 4 Research Focus:cell-cell communication· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Assay:spatial transcriptomics· 2 Assay:bulk RNA-seq· 1 Research Focus:cancer & tumor microenvironment· 1

Frequent Co-Authors

D. Grases· 2 shared A. Bernat· 1 shared A. Elofsson· 1 shared A. Fortian· 1 shared A. Frost· 1 shared A. Godzik· 1 shared A. Lazar· 1 shared A. Machado-Lopez· 1 shared

Activity by Year

2016-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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2 shared papersCell Biology

D. Grases

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Effect of Aging on the Human Myometrium at Single-Cell Resolution

P. Punzon-Jimenez, A. Machado-Lopez, R. Perez-Moraga, J. Llera-Oyola, D. Grases, M. Galvez-Viedma, M. AlSibai, E. Satorres, R. Badenes, C. Ferrer, E. Porta-Pardo, B. Roson, C. Simon, A. Mas

This study examines aging effects on the human myometrium using single-cell and spatial transcriptomics, identifying cell subpopulations and communication changes linked to pregnancy complications.

bioRxiv · Jul 3, 2023Cell Biology

The spatial landscape of Cancer Hallmarks reveals patterns of tumor ecology

M. Sibai, S. Cervilla, D. Grases, E. Musulen, R. Lazcano, C.-K. Mo, V. Davalos, A. Fortian, M. Romeo, A. Bernat, C. Tokheim, E. Grande, F. Real, J. Barretina, A. Lazar, , E. Porta-Pardo

The paper uses spatial transcriptomics to analyze Cancer Hallmarks in 63 tumors, revealing spatial patterns of hallmark activity and interdependencies between cancer and tumor microenvironment.

bioRxiv · Jun 18, 2022Cancer Biology

A structural biology community assessment of AlphaFold 2 applications

M. Akdel, D. E. Pires, E. Porta-Pardo, J. Janes, A. O. Zalevsky, B. Meszaros, P. Bryant, L. L. Good, R. A. Laskowski, G. Pozzati, A. Shenoy, W. Zhu, P. Kundrotas, V. Ruiz-Serra, C. H. Rodrigues, , P. Beltrao

This study assesses AlphaFold 2's applications in structural biology, finding it outperforms existing tools in predicting disorder, complexes, and structural features with high confidence.

bioRxiv · Sep 26, 2021 · PreprintBiophysics

Germline genetic contribution to the immune landscape of cancer

R. W. Sayaman, M. Saad, V. Thorsson, W. Hendrickx, J. Roelands, Y. Mokrab, F. Farshidfar, T. Kirchhoff, R. F. Sweis, O. F. Bathe, E. Porta-Pardo, M. J. Campbell, C. Stretch, D. Hu, S. Huntsman, , D. Bedognetti

This study identifies germline genetic variants associated with immune traits in cancer, revealing their impact on the tumor immune microenvironment.

bioRxiv · Jan 30, 2020Immunology

The functional impact of alternative splicing in cancer

H. Climente-Gonzalez, E. Porta-Pardo, A. Godzik, E. Eyras

The paper analyzes alternative splicing changes in cancer samples to identify their functional impact and potential role in tumorigenesis, finding a negative correlation with somatic mutations and proposing some as oncogenic processes.

bioRxiv · Sep 21, 2016Cancer Biology