Author

G. Metcalf

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Assay:whole-genome sequencing· 3 Organism:human· 2 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Research Focus:host-pathogen & immune response· 1

Frequent Co-Authors

D. M. Muzny· 3 shared J. F. Petrosino· 3 shared K. L. Hoffman· 3 shared R. A. Gibbs· 3 shared A. Rajan· 2 shared H. Doddapaneni· 2 shared M. C. Ross· 2 shared M. K. Estes· 2 shared

Activity by Year

2020-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersMicrobiology

D. M. Muzny

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Functional Genomics of Gastrointestinal Escherichia coli Isolated from Patients with Cancer and Diarrhea

H. Carter, J. Clark, L. G. Carlin, E. Vaughan, A. Rajan, A. Olvera, X. Yu, X.-L. Zeng, A. Kambal, M. Holder, X. Qin, R. A. Gibbs, J. F. Petrosino, D. M. Muzny, H. Doddapaneni, , P. C. Okhuysen

The paper investigates E. coli strains from cancer patients with diarrhea, finding novel adherence patterns and high antibiotic resistance gene carriage.

bioRxiv · May 31, 2023 · PreprintMicrobiology

Intra- and Inter-host Evolution of Human Norovirus in Healthy Adults

S. Ramani, S. J. Javornik Cregeen, A. Surathu, F. H. Neill, D. M. Muzny, H. Doddapaneni, V. K. Menon, K. L. Hoffman, M. C. Ross, G. Metcalf, A. R. Opekun, D. Y. Graham, R. A. Gibbs, J. F. Petrosino, M. K. Estes, R. L. Atmar

The paper studies intra- and inter-host evolution of human norovirus in healthy adults using a capture-based sequencing approach, finding limited conserved immune pressure-driven evolution.

bioRxiv · May 30, 2023 · PreprintMicrobiology

Oligonucleotide capture sequencing of the SARS-CoV-2 genome and subgenomic fragments from COVID-19 individuals

H. V. Doddapaneni, S. J. Cregeen, R. Sucgang, Q. Meng, X. Qing, V. Avadhanula, H. Chao, V. Menon, E. Nicholson, D. Henke, F.-A. Piedra, A. Rajan, Z. Momin, K. Kottapalli, K. L. Hoffman, , R. A. Gibbs

This study develops an oligonucleotide capture sequencing method to generate SARS-CoV-2 genomic and transcriptome sequences from clinical samples, revealing differential transcriptional activity and ORF10 expression.

bioRxiv · Jul 27, 2020 · PreprintMicrobiology