Author

V. K. Menon

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Microbiology· 5 Cancer Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:human· 5 Approach:experimental assay· 4 Assay:bulk RNA-seq· 3 Research Focus:differential expression· 3 Research Focus:cell type annotation· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Approach:benchmark study· 1

Frequent Co-Authors

H. Doddapaneni· 5 shared K. L. Hoffman· 5 shared S. J. Javornik Cregeen· 4 shared A. Rajan· 3 shared D. M. Muzny· 3 shared J. F. Petrosino· 3 shared M. C. Ross· 3 shared R. A. Gibbs· 3 shared

Activity by Year

2021-2023 · peak 4/yr

Co-Author Collaboration Network

10 top collaborators · 42 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

5 shared papersMicrobiology

H. Doddapaneni

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

Tryptophan Metabolites And Their Predicted Microbial Sources In Fecal Samples From Healthy Individuals

C. L. Chappell, K. L. Hoffman, P. L. Lorenzi, L. Tan, J. Petrosino, R. Gibbs, D. Muzny, H. Doddapaneni, M. C. Ross, V. K. Menon, A. Surathu, S. J. Javornik Cregeen, A. G. Reyes, P. C. Okhuysen

The paper measures tryptophan metabolites in fecal samples from healthy individuals and links them to bacterial abundance and predicted microbial sources.

bioRxiv · Dec 20, 2023 · PreprintMicrobiology

Functional Genomics of Gastrointestinal Escherichia coli Isolated from Patients with Cancer and Diarrhea

H. Carter, J. Clark, L. G. Carlin, E. Vaughan, A. Rajan, A. Olvera, X. Yu, X.-L. Zeng, A. Kambal, M. Holder, X. Qin, R. A. Gibbs, J. F. Petrosino, D. M. Muzny, H. Doddapaneni, , P. C. Okhuysen

The paper investigates E. coli strains from cancer patients with diarrhea, finding novel adherence patterns and high antibiotic resistance gene carriage.

bioRxiv · May 31, 2023 · PreprintMicrobiology

Intra- and Inter-host Evolution of Human Norovirus in Healthy Adults

S. Ramani, S. J. Javornik Cregeen, A. Surathu, F. H. Neill, D. M. Muzny, H. Doddapaneni, V. K. Menon, K. L. Hoffman, M. C. Ross, G. Metcalf, A. R. Opekun, D. Y. Graham, R. A. Gibbs, J. F. Petrosino, M. K. Estes, R. L. Atmar

The paper studies intra- and inter-host evolution of human norovirus in healthy adults using a capture-based sequencing approach, finding limited conserved immune pressure-driven evolution.

bioRxiv · May 30, 2023 · PreprintMicrobiology

Longitudinal host transcriptional responses to SARS-CoV-2 infection in adults with extremely high viral load

V. Avadhanula, C. J. Creighton, L. Ferlic-Stark, R. Sucgang, Y. Zhang, D. Nagaraj, E. G. Nicholson, A. Rajan, V. K. Menon, H. Doddapaneni, D. M. Muzny, G. A. Metcalf, S. J. J. Cregeen, K. L. Hoffman, R. A. Gibbs, , P. A. Piedra

The paper examines longitudinal transcriptional responses to SARS-CoV-2 infection in adults with varying viral loads, identifying gene expression patterns and host responses over time.

bioRxiv · May 24, 2023Microbiology

Radiation-Induced Autophagy Regulates the Fibroblast Mitochondrial Stress Response and Crosstalk with Triple-Negative Breast Cancer Cells

K. C. Corn, S. E. Martello, V. K. Menon, L. S. Britto, K. K. Simmons, Y. K. Mohamed, Y. I. Ivanova, A. A. Ghelmansaraei, S. A. Weidenbach, T. Zhu, E. Krystofiak, J. D. Young, V. Gama, M. Rafat

This study shows that radiation-induced autophagy in fibroblasts alters their mitochondrial stress response, promoting an aggressive phenotype in triple-negative breast cancer cells.

bioRxiv · May 17, 2022Cancer Biology

Multiple RSV strains infecting HEp-2 and A549 cells reveal cell line-dependent differences in resistance to RSV infection.

A. Rajan, F.-A. Piedra, L. Aideyan, T. McBride, M. J. Robertson, H. L. Johnson, G. M. Aloisio, D. M. Henke, C. Coarfa, F. Stossi, V. K. Menon, H. Doddapaneni, D. Muzny, S. J. Javornik Cregeen, K. L. Hoffman, , P. A. Piedra

The paper compares RSV infection in HEp-2 and A549 cells using four strains, finding subgroup-dependent gene expression differences and A549's greater antiviral response.

bioRxiv · Jun 15, 2021 · PreprintMicrobiology