Author

H. R. Ueda

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 2 Cell Biology· 2 Biochemistry· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Assay:imaging· 3 Organism:mouse· 3 Research Focus:cell type annotation· 2 Research Focus:imputation· 2 Research Focus:cell signaling & trafficking· 1 Research Focus:dimensionality reduction· 1 Approach:microscopy & imaging analysis· 1

Frequent Co-Authors

E. A. Susaki· 2 shared A. Ishijima· 1 shared A. K. Glaser· 1 shared A. K. Hempton· 1 shared A. Millius· 1 shared A. Yamasaki· 1 shared B. J. Beliveau· 1 shared C. R. Stoltzfus· 1 shared

Activity by Year

2020-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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2 shared papersBiochemistry

E. A. Susaki

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Bioorthogonal chemical labelling of endogenous neurotransmitter receptors in living mouse brains

H. Nonaka, S. Sakamoto, K. Shiraiwa, M. Ishikawa, T. Tamura, K. Okuno, S. Kiyonaka, E. A. Susaki, C. Shimizu, H. R. Ueda, W. Kakegawa, I. Arai, M. Yuzaki, I. Hamachi

This paper develops a method to label endogenous neurotransmitter receptors in living mouse brains using LDAI chemistry, enabling spatial mapping and dynamic analysis of receptors in health and disease.

bioRxiv · Jan 16, 2023 · PreprintBiochemistry

Circadian ribosome profiling reveals a role for the Period2 upstream open reading frame in sleep

A. Millius, R. Yamada, H. Fujishima, K. Maeda, D. M. Standley, K. Sumiyama, D. Perrin, H. R. Ueda

This study uses ribosome profiling to show that uORFs in Per2 mRNA regulate translation and sleep in mice.

bioRxiv · Aug 9, 2022 · PreprintCell Biology

Phosphorylation by casein kinase 2 ensures ER-phagy receptor TEX264 binding to ATG8 proteins

H. Chino, A. Yamasaki, K. L. Ode, H. R. Ueda, N. N. Noda, N. Mizushima

The paper shows phosphorylation of TEX264's LIR by casein kinase 2 enhances its binding to ATG8 proteins, crucial for ER-phagy, through hydrogen bonds not achievable with acidic residues.

bioRxiv · Feb 11, 2022 · PreprintCell Biology

Acoustic light-sheet microscopy

S. Wunderl, A. Ishijima, E. Susaki, Z. Xu, H. Song, H. Zha, T. Azuma, I. Sakuma, H. Fukuoka, E. Okada, H. R. Ueda, S. Takagi, K. Nakagawa

Acoustic light-sheet microscopy overcomes the trade-off between field-of-view and axial resolution in light-sheet microscopy by guiding light through acoustic pulses.

bioRxiv · Aug 20, 2021 · PreprintBioengineering

A hybrid open-top light-sheet microscope for multi-scale imaging of cleared tissues

A. K. Glaser, K. W. Bishop, L. A. Barner, E. A. Susaki, S. I. Kubota, G. Gao, R. B. Serafin, P. Balaram, E. Turschak, P. R. Nicovich, H. Lai, L. A. G. Lucas, Y. Yi, E. K. Nichols, H. Huang, , J. T. C. Liu

The paper introduces a hybrid light-sheet microscope that enables versatile multi-scale imaging of cleared tissues with varying resolution, geometry, and compatibility requirements.

bioRxiv · May 6, 2020Bioengineering