Author

J.-G. Chen

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 7 Microbiology· 2

Signature Assays, Organisms & Methods

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Approach:experimental assay· 6 Organism:plant (other)· 6 Research Focus:cell type annotation· 4 Research Focus:gene regulatory network inference· 4 Assay:metagenomics· 3 Assay:proteomics· 3 Approach:statistical model· 3 Organism:Arabidopsis· 2

Frequent Co-Authors

G. A. Tuskan· 7 shared W. Muchero· 7 shared P. E. Abraham· 3 shared T. Yao· 3 shared X. Yang· 3 shared D. Jacobson· 2 shared G. Taylor· 2 shared G. Yuan· 2 shared

Activity by Year

2021-2024 · peak 4/yr

Co-Author Collaboration Network

10 top collaborators · 26 mutual co-author links

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7 shared papersPlant Biology

G. A. Tuskan

Mutual co-authors in cluster

Author profile →

9 papers

Recent·Most cited

Climate adaptation in P. trichocarpa: key adaptive loci identified for stomata and leaf traits

M. C. Klein, Z. Meng, J. Bailey-Bale, S. Milner, P. Shi, W. Muchero, J.-G. Chen, T. J. Tschaplinski, D. Jacobson, J. Lagergren, M. Lane, C. O Brien, H. Chhetri, M. Shu, P. Freer-Smith, , G. Taylor

This study identifies key genetic loci associated with stomatal and leaf traits in Populus trichocarpa that contribute to climate adaptation, showing smaller stomata in genotypes from arid regions.

bioRxiv · Jul 11, 2024 · PreprintPlant Biology

Elemental profiling and genome-wide association mapping reveal genomic variants modulating ionomic composition in Populus trichocarpa leaves

R. Ployet, K. Feng, J. Zhang, I. Baxter, D. C. Glasgow, J.-G. Chen, G. A. Tuskan, T. Tschaplinski, D. J. Weston, M. Z. Martin, W. Muchero

This study identifies genetic loci modulating ionomic composition in Populus trichocarpa leaves using GWAS and multi-platform ionome profiling.

bioRxiv · May 3, 2024 · PreprintPlant Biology

Catabolic pathway acquisition by soil pseudomonads readily enables growth with salicyl alcohol but does not affect colonization of Populus roots

S. Christel, A. A. Carrell, L. H. Burdick, M. I. Villalobos Solis, P. E. Abraham, S. Jawdy, J. Chaves, N. Engle, T.-K. Berhane, T. Yao, J.-G. Chen, W. Muchero, T. Tschaplinski, M. A. Cregger, J. K. Michener

The paper transfers a catabolic pathway for salicyl alcohol in Pseudomonas soil isolates, showing it enables rapid catabolism but does not confer a fitness advantage in rhizosphere competition.

bioRxiv · Jan 17, 2024 · PreprintMicrobiology

Harnessing the power of poplar tree natural genetic variation for the development of future sustainable biofuels and bioproducts: a droughted marginal-land experiment for multi-disciplinary investigations

G. Taylor, J. H. Bailey-Bale, S. Milner, M. C. Klein, J.-G. Chen, W. Muchero, P. H. Freer-Smith, T. J. Tschaplinski, G. A. Tuskan

The paper describes a field experiment with over 1,000 poplar genotypes under drought to study genetic variation for sustainable biofuel crops.

bioRxiv · Jan 11, 2024 · PreprintPlant Biology

Plant inositol transport influences bacterial colonization phenotypes

B. S. O'Banion, P. Jones, A. A. Demetros, B. R. Kelley, A. S. Wagner, J.-G. Chen, W. Muchero, T. B. Reynolds, D. Jacobson, S. L. Lebeis

The paper investigates how plant inositol transport affects bacterial colonization by combining metatranscriptomic data and genetic experiments in Arabidopsis.

bioRxiv · May 3, 2023Microbiology

Functional analysis of Salix purpurea genes support roles for ARR17 and GATA15 as master regulators of sex determination

B. Hyden, D. L. Carper, P. E. Abraham, G. Yuan, T. Yao, L. Baumgart, Y. Zhang, C. Chen, R. O'Malley, J.-G. Chen, X. Yang, R. L. Hettich, G. A. Tuskan, L. B. Smart

This study functionally characterizes candidate sex determination genes in Salix purpurea using Arabidopsis, supporting ARR17 and GATA15 as master regulators and identifying downstream transcription factors.

bioRxiv · Apr 21, 2023 · PreprintPlant Biology

GWAS identifies candidate regulators of in planta regeneration in Populus trichocarpa

M. F. Nagle, J. Yuan, D. Kaur, C. Ma, E. Peremyslova, Y. Jiang, A. Nino de Rivera, S. Jawdy, J.-G. Chen, K. Feng, T. B. Yates, G. A. Tuskan, W. Muchero, F. Li, S. H. Strauss

This study uses GWAS to identify candidate genes regulating in planta regeneration in Populus trichocarpa, finding over 200 genes involved in cell adhesion, stress signaling, and hormone pathways.

bioRxiv · Jun 8, 2022 · PreprintPlant Biology

Biomass formation and sugar release efficiency of Populus modified by altered expression of a NAC transcription factor

R. S. Payyavula, R. Badmi, S. S. Jawdy, M. Rodriguez, L. Gunter, R. W. Sykes, K. A. Winkeler, C. M. Collins, W. H. Rottmann, J.-G. Chen, X. Yang, G. A. Tuskan, U. C. Kalluri

This study investigates the role of PdWND1B in Populus wood formation and biofuel conversion by over-expressing or silencing it, showing effects on biomass, cell wall composition, and sugar release efficiency.

bioRxiv · Sep 28, 2021Plant Biology

Plant-based biosensors for detecting CRISPR-mediated genome engineering

G. Yuan, M. M. Hassan, T. Yao, H. Lu, M. M. Vergara, J. Labbe, W. Muchero, C. Pan, J.-G. Chen, G. A. Tuskan, Y. Qi, P. E. Abraham, X. Yang

This study develops plant-based biosensors to detect CRISPR/Cas tools in real-time, demonstrating their effectiveness in detecting various CRISPR functions in multiple plant species.

bioRxiv · Sep 27, 2021Plant Biology