Author

Jeanne Fredrickson

University of Washington

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Assay:DNA methylation· 2 Approach:experimental assay· 2 Organism:human· 2 Organism:mouse· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Brendan F. KohrniD· 2 shared David Joseph MarcinekiD· 2 shared Kristine A. TsantilasiD· 2 shared Mariya T. SweetwyneiD· 2 shared Michael J. HippiD· 2 shared Mónica Sánchez-ContrerasiD· 2 shared Peter S. RabinovitchiD· 2 shared Scott R. KennedyiD· 2 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersGenomics

Brendan F. KohrnORCID

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3 papers

Recent·Most cited

Multi-tissue landscape of somatic mtDNA mutations indicates tissue specific accumulation and removal in aging

Mónica Sánchez-Contreras, Mariya T. Sweetwyne, Kristine A. Tsantilas, Jeremy A. Whitson, Matthew D. Campbell, Brendan F. Kohrn, Hyeon Jeong Kim, Michael J. Hipp, Jeanne Fredrickson, Megan M. Nguyen, James B. Hurley, David Joseph Marcinek, Peter S. Rabinovitch, Scott R. Kennedy

The paper detects age-related tissue-specific accumulation of mtDNA mutations in mice and shows oxidative damage mutations are reduced with treatment.

eLife · Feb 17, 2023Peer-reviewedGenomics

A mutational gradient drives somatic mutation accumulation in mitochondrial DNA and influences germline polymorphisms and genome composition

Mónica Sánchez-Contreras, Mariya T. Sweetwyne, Brendan F. Kohrn, Kristine A. Tsantilas, Michael J. Hipp, Elizabeth K. Schmidt, Jeanne Fredrickson, Jeremy A Whitson, Matthew D Campbell, Peter S. Rabinovitch, David Joseph Marcinek, Scott R. Kennedy

The paper identifies a mutational gradient in mtDNA that correlates with replication and influences mutation accumulation and genome composition.

Nucleic Acids Research · Sep 22, 2021Peer-reviewedGenomics

Telomere-to-telomere assembly of a complete human X chromosome

Karen H. Miga, Sergey Koren, Arang Rhie, Mitchell Robert Vollger, Ariel Gershman, Andrey V. Bzikadze, Shelise Y. Brooks, Edmund Howe, David Porubskỳ, Glennis A. Logsdon, Valérie Schneider, Tamara Potapova, Jonathan M. D. Wood, William Chow, Joel C. Armstrong, , Adam M. Phillippy

The paper presents a gapless, telomere-to-telomere assembly of the human X chromosome using ultra-long-read nanopore sequencing and complementary technologies.

Nature · Jul 14, 2020Peer-reviewedBioinformatics