Author

John Adams

Texas A&M University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genetics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

Aidan R. O’BrieniD· 1 shared Amy Gonzales· 1 shared Andrew S. I. LoudoniD· 1 shared Andrew W. TraffordiD· 1 shared Ane Miren SalvadoriD· 1 shared Anne N. HarringtoniD· 1 shared Antony D. AdamsoniD· 1 shared Anyonya R. GunturiD· 1 shared

Activity by Year

2019-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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1 shared paperGenetics

Aidan R. O’BrienORCID

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2 papers

Recent·Most cited

Transcriptional stochasticity reveals multiple mechanisms of long noncoding RNA regulation at the Xist - Tsix locus

Benjamin K. Kesler, John Adams, Gregor Neuert

The paper investigates how transcriptional stochasticity influences the regulation of Xist and Tsix at the XCI locus through different mechanisms based on nascent transcription levels.

Nature Communications · May 6, 2025Peer-reviewedSystems Biology

Re-Evaluating One-step Generation of Mice Carrying Conditional Alleles by CRISPR-Cas9-Mediated Genome Editing Technology

Channabasavaiah B. Gurumurthy, Aidan R. O’Brien, Rolen M. Quadros, John Adams, Pilar Alcaide, Shinya Ayabe, Johnathan L. Ballard, Surinder K. Batra, M.-C. Beauchamp, Kathleen A. Becker, Guillaume Bernas, David Brough, Francisco Javier Carrillo-Salinas, Wesley Chan, Hanying Chen, , Atsushi Yoshiki

The paper re-evaluates the efficiency of a CRISPR-Cas9 method for generating conditional knockout alleles in mice, finding very low success rates and high rates of undesired alleles.

Genome biology · Aug 25, 2019Peer-reviewedGenetics