Author

Linh Nguyen

Earlham College

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

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Cell Biology· 1 Genomics· 1 Microbiology· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Research Focus:cell type annotation· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:clustering· 1 Approach:comparative / phylogenetic analysis· 1 Assay:cryo-EM· 1 Approach:deep learning· 1

Frequent Co-Authors

Aaron T. Dirck· 1 shared Anthony JulianoiD· 1 shared Aya CheaitoiD· 1 shared Carson J. PurnelliD· 1 shared Christopher J. Parkins· 1 shared Daniel MalouliiD· 1 shared Elina ThomasiD· 1 shared Eric Potter· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 13 mutual co-author links

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1 shared paperMicrobiology

Aaron T. Dirck

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Author profile →

4 papers

Recent·Most cited

HCMV promotes viral reactivation through the coordinated regulation of Notch signaling by UL8 and miR-UL36

Aaron T. Dirck, Nicole L. Diggins, Wilma D. Perez, Christopher J. Parkins, Michael Daily, Rebekah Turner, Luke Slind, Linh Nguyen, Daniel Malouli, Guanming Wu, Meaghan H. Hancock, Patrizia Caposio

This study shows HCMV uses UL8 and miR-UL36 to suppress Notch signaling, promoting reactivation in CD34+ hematopoietic progenitor cells.

mBio · Feb 9, 2026Peer-reviewedMicrobiology

Associations between amygdala connectivity and experienced discrimination in children

Nicholas J. Goode, Eric Potter, Meerab Rasheed, Mariela Camacho, Rinko Higashi, Linh Nguyen, Shubangini Shah, Óscar Miranda-Domínguez, Robert J. M. Hermosillo, Anthony Juliano, Aya Cheaito, Elina Thomas

The paper examines how perceived discrimination relates to amygdala connectivity in children, finding stronger connections in BIPOC youth with higher trauma exposure.

bioRxiv · Jan 9, 2026 · PreprintNeuroscience

Topsicle: a method for estimating telomere length from whole genome long-read sequencing data

Linh Nguyen, Jae Young Choi

Topsicle estimates telomere length from whole genome long-read sequencing data using k-mer and change point detection, showing robustness and accuracy in plant and human cancer cells.

bioRxiv · Jul 10, 2025 · PreprintGenomics

Training Generalized Segmentation Networks with Real and Synthetic Cryo-ET data.

Carson J. Purnell, Jessica E. Heebner, Linh Nguyen, Michael T. Swulius, Ryan K. Hylton, Seth G. Kabonick, Michael A. Grillo, Stephanie L. Grillo, Sergei A. Grigoryev, Frederick A. Heberle, M. Neal Waxham

The paper trains segmentation networks for cryo-ET data using synthetic and real data, showing that synthetic data with molecular diversity improves performance but real data is needed for generalization.

bioRxiv · Jan 31, 2025 · PreprintCell Biology