Author

M. Boeckh

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 4 Immunology· 1

Signature Assays, Organisms & Methods

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Organism:human· 5 Approach:experimental assay· 3 Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Research Focus:clustering· 2 Research Focus:differential expression· 2 Assay:metagenomics· 2 Assay:proteomics· 2

Frequent Co-Authors

T. Bedford· 2 shared T. Stevens-Ayers· 2 shared A. E. Kim· 1 shared A. Greninger· 1 shared A. Hurt· 1 shared A. L. Greninger· 1 shared A. M. Casto· 1 shared A. Waghmare· 1 shared

Activity by Year

2017-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 11 mutual co-author links

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2 shared papersMicrobiology

T. Bedford

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Author profile →

5 papers

Recent·Most cited

Within-host rhinovirus evolution in upper and lower respiratory tract highlights capsid variability and mutation-independent compartmentalization

N. Makhsous, S. Goya, C. Avendano, J. Rupp, J. Kuypers, K. R. Jerome, M. Boeckh, A. Waghmare, A. L. Greninger

This study tracks HRV evolution in immunocompromised patients, finding no genetic adaptation for URT to LRT progression and highlighting capsid variability and mutation-independent compartmentalization.

bioRxiv · May 11, 2023Microbiology

Convergent clonal selection of donor- and recipient-derived CMV-specific T cells in hematopoietic stem cell transplant patients

J. R. Erickson, T. Stevens-Ayers, F. Mair, B. Edmison, M. Boeckh, P. H. Bradley, M. Prlic

The paper tracks T cell competition in CMV-reactivation post-transplant, finding donor-derived T cells expand but recipient-derived memory T cells remain dominant due to convergent clonal selection.

bioRxiv · Sep 14, 2021Immunology

Evaluating Specimen Quality and Results from a Community-Wide, Home-Based Respiratory Surveillance Study

A. E. Kim, E. Brandstetter, N. Wilcox, J. Heimonen, C. Graham, P. D. Han, L. M. Starita, D. J. McCulloch, A. M. Casto, D. A. Nickerson, M. M. Van de Loo, J. Mooney, M. Ilcisin, K. A. Fay, J. Lee, , H. Chu

The paper evaluates the quality of specimens and results from a home-based respiratory surveillance study to assess its feasibility for community-level monitoring of respiratory pathogens.

bioRxiv · Dec 7, 2020Microbiology

Mapping person-to-person variation in viral mutations that escape polyclonal serum targeting influenza hemagglutinin

J. M. Lee, R. Eguia, S. J. Zost, S. Choudhary, P. C. Wilson, T. Bedford, T. Stevens-Ayers, M. Boeckh, A. Hurt, S. S. Lakdawala, S. E. Hensley, J. D. Bloom

The paper maps how amino-acid mutations in influenza's hemagglutinin affect neutralization by polyclonal human sera, showing individual variation in escape mutations not observed in ferrets.

bioRxiv · Jun 13, 2019Microbiology

Genomic and proteomic analysis of Human herpesvirus 6 reveals distinct clustering of acute versus inherited forms and reannotation of reference strain

A. Greninger, G. Knudsen, P. Roychoudhury, D. Hanson, R. A. Hall Sedlak, H. Xie, J. Guan, T. Nguyen, V. Peddu, M. Boeckh, M.-L. Huang, L. Cook, D. Depledge, D. Zerr, D. Koelle, , K. Jerome

This study sequences HHV-6B and iciHHV-6 genomes, identifies geographic clustering and recombination in active infections, and reannotates the HHV-6B genome using transcriptomics and proteomics.

bioRxiv · Aug 27, 2017Microbiology